Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02]
39,413 sequences; 107,915,492 total letters
Query= NC_019708.1
Length=37595
Score E
Sequences producing significant alignments: (Bits) Value
seq8566 80.6 6e-11
>seq8566
Length=6269
Score = 80.6 bits (88), Expect = 6e-11
Identities = 284/444 (64%), Gaps = 0/444 (0%)
Strand=Plus/Minus
Query 15460 CGATACGGCTTCAATCAGCTGGAAATGACAGCCATCGGCTGCACCAGGCAGTCAGAGGCG 15519
|| || ||| ||||| |||||| || | |||||||| |||||| | |||| |||||
Sbjct 3120 CGCTATGGCGACAATCCGCTGGAGATCAGTGCCATCGGTTGCACCCGCGAGTCGGAGGCT 3061
Query 15520 AACCGAAAGGGGCGCTGGGGTATTCTCACCAACAACAAGGATCGCGTTGTTTCGTTTGAT 15579
| || || |||| | || || ||| |||||| | | ||| | || |
Sbjct 3060 CAGCGCCGCGGCAAGTGGGCGCTGCTGACAAACTCCAAGGACAGGGCTGTCACATTCAAG 3001
Query 15580 GTCGGGCTGGACGGAAACATTCCGCAGCCGGGCTACATCATCGCCGTGGCAGACGAGCTG 15639
||||| || || || ||| |||| || || ||| | ||| | | || |||||||||
Sbjct 3000 GTCGGCCTTGATGGGCGCATCCCGCTCCCTGGATACGTGATCCCAATCGCGGACGAGCTG 2941
Query 15640 CTTTCCGGAAAGGTTATGGGCGGCCGCATCAGCGCCGTTAACGGTCGCGTTATCAAACTT 15699
|| | || | ||||||| |||||| || || ||||| || |||| ||
Sbjct 2940 CTGGCGGGCCGGCCGGTGGGCGGGCGCATCTCTGCGGTGAACGGCAAAGTCATCACCCTG 2881
Query 15700 GACCGCGTAGCTGATGCAGCACCAGGTGATCGCCTTATTCTCAACATGCCTTCCGGAGCG 15759
||||||| | | || || ||||| ||||| || |||||| ||||| |||| |
Sbjct 2880 GACCGCGATACCCAGGCGAAGCCCGGTGACCGCCTGATCCTCAACCTGCCTGACGGAAAG 2821
Query 15760 TCGCAGAGCAGGACCATTCAGGCCGTGAACGGGGAATCAGTCACAGTCACCACGGCATAC 15819
| || || | ||| | || || | ||| ||||| ||||||||||| |||
Sbjct 2820 TGCGAGGGCCGCACCGTGCAACTGGTCAGCGGCCGCCAGGTCACGGTCACCACGGCGTAC 2761
Query 15820 AGTGAGACGCCACAGGCCGAAGCTGTTTGGGTGGTTGAATCTGACGAGCTTTACGCGCAG 15879
| | |||| || ||| || |||| | | || ||||||| || | | |
Sbjct 2760 TCCGTGGCGCCTGAGCGTGAACTGGTGTGGGCGCTCGACGCTGACGACCTGGCCATCCCG 2701
Query 15880 CAGTATCGTGTTGTCAGCGTCTCC 15903
| |||||| || |||||| |||
Sbjct 2700 CTGTATCGGGTGACCAGCGTTTCC 2677
Score = 80.6 bits (88), Expect = 6e-11
Identities = 75/93 (81%), Gaps = 2/93 (2%)
Strand=Plus/Minus
Query 14767 AAGATCGGCGACACGATGATGCT-GCAGAGCTTCACCGAGGTGATTGACGCCAAACTGCG 14825
|| ||| |||||||||| | | || | ||||||| | |||||| |||||||| ||||
Sbjct 3810 AAAATCTCCGACACGATGCAGATCGCCG-GCTTCACGGGGGTGATCGACGCCAAGTTGCG 3752
Query 14826 CTACCCGAACACCGCGCTGCTCTACGTCGAATT 14858
||||||||||||||| |||||||| |||| ||
Sbjct 3751 GTACCCGAACACCGCGTTGCTCTACATCGAGTT 3719
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 120126151106442
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |