Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_019715.1 Length=39578 Score E Sequences producing significant alignments: (Bits) Value seq8566 82.4 2e-11 >seq8566 Length=6269 Score = 82.4 bits (90), Expect = 2e-11 Identities = 234/360 (65%), Gaps = 0/360 (0%) Strand=Plus/Minus Query 15738 CGATACGGCTTCAATCAGCTGGAAATGACAGCCATCGGCTGCACCAGGCAGTCAGAGGCG 15797 || || ||| ||||| |||||| || | |||||||| |||||| | |||| ||||| Sbjct 3120 CGCTATGGCGACAATCCGCTGGAGATCAGTGCCATCGGTTGCACCCGCGAGTCGGAGGCT 3061 Query 15798 AACCGAAAGGGGCGCTGGGGTATTCTCACCAACAACAAGGATCGCGTTGTTTCGTTTGAT 15857 | || || |||| | || || ||| |||||| | | ||| | || | Sbjct 3060 CAGCGCCGCGGCAAGTGGGCGCTGCTGACAAACTCCAAGGACAGGGCTGTCACATTCAAG 3001 Query 15858 GTCGGGCTGGACGGAAACATTCCGCAGCCGGGCTACATCATCGCCGTGGCAGACGAGCTG 15917 ||||| || || || ||| |||| || || ||| | ||| | | || ||||||||| Sbjct 3000 GTCGGCCTTGATGGGCGCATCCCGCTCCCTGGATACGTGATCCCAATCGCGGACGAGCTG 2941 Query 15918 CTTTCCGGAAAGGTTATGGGCGGCCGCATCAGCGCCGTTAACGGTCGCGTTATCAAACTT 15977 || | || | ||||||| |||||| || || ||||| || |||| || Sbjct 2940 CTGGCGGGCCGGCCGGTGGGCGGGCGCATCTCTGCGGTGAACGGCAAAGTCATCACCCTG 2881 Query 15978 GACCGCGTAGCTGATGCAGCACCAGGTGATCGCCTTATTCTCAACCTGCCTTCCGGAGCG 16037 ||||||| | | || || ||||| ||||| || |||||||||||| |||| | Sbjct 2880 GACCGCGATACCCAGGCGAAGCCCGGTGACCGCCTGATCCTCAACCTGCCTGACGGAAAG 2821 Query 16038 TCGCAGAGCAGGACCATTCAGGCCGTGAACGGGGAATCAGTCACAGTCACCACGGCATAC 16097 | || || | ||| | || || | ||| ||||| ||||||||||| ||| Sbjct 2820 TGCGAGGGCCGCACCGTGCAACTGGTCAGCGGCCGCCAGGTCACGGTCACCACGGCGTAC 2761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126468781179240