Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_019717.1 Length=45366 Score E Sequences producing significant alignments: (Bits) Value seq8567 111 5e-20 >seq8567 Length=29384 Score = 111 bits (122), Expect = 5e-20 Identities = 327/493 (66%), Gaps = 12/493 (2%) Strand=Plus/Minus Query 13821 TGCAACGGCACGCTGACGGCCTGCAAGCTCCGGCACGGAGACAGCAACGAGCTGCCGTTC 13880 ||||| ||| ||| || |||||||| | || ||| || |||||||| || | ||| Sbjct 1786 TGCAAAGGCTGTCTGTCGTCCTGCAAGTTGCGATTCGGCGAGAGCAACGAACTTTCCTTC 1727 Query 13881 GGTGGTTTCCCCGGTACATCTCTTAT---CAGGAGTTGAT-ATGCGCCAGAAAACCATTG 13936 || || ||||||| || || || |||||| ||| |||||| || | | |||| Sbjct 1726 GGCGGATTCCCCGCCGTGTCCCTCATTGCCAGGAGCTGACCATGCGCAAGCACATAATTG 1667 Query 13937 ATGCCATCATGGCACACGCTGCAGCGGAATATCCGCGCGAGTGCTGCGGCGTGGTGGCAC 13996 || ||| ||| || || |||||||| |||||| ||||||||||| || || Sbjct 1666 CGGCGATCCAGGCGCATGCGGCAGCGGAGTATCCGAAAGAGTGCTGCGGGCTGCTGCTGG 1607 Query 13997 AGAAAAGCCGGGTTGAGCGCTATTTTCCCTGTCGTAATCTCGCAGCAGAGCCGACTGAAC 14056 | | |||| || || || || || || || |||| | ||||||| ||| Sbjct 1606 CTGTAGGGCGGGCGCAGAAGTACTTCCCATGCCGGAACATCGCCACGGAGCCGAACGAAG 1547 Query 14057 ATTTTCACCTGTCCCCCGAAGATTACGCAGCGGCAGAAGA-CTGGGGGACCGTGGTGGCC 14115 | |||| || || || || ||||| || || || || ||||| || ||| | | | Sbjct 1546 AGTTTCGACTTGATCCTGAGGACTACGCTGCAGCGGAGGACCTGGGCGA-GGTGATCGGC 1488 Query 14116 ATTGTTCACAGCCATCCTGATGCGACGACGCAGGCCAGC-GAGCTGGATAAGGCACAGTG 14174 ||||| ||| || || || || || | || |||| | || || ||| ||| Sbjct 1487 ATTGTCCACTCGCACCCGGACGCCACCA-GCCGGCCGTCACCGCACGACTTGGCCATGTG 1429 Query 14175 TGATGCAACGCTGCTGCCCTGGCATATTGTGAGCTGGCCAGAGGGGGATTTACGTACCAT 14234 ||| | ||| |||||||||| ||| || ||||| ||||||||||| || || || Sbjct 1428 TGAGGTCACGGCCTTGCCCTGGCACATTCTGTCGTGGCCCGAGGGGGATTTGCGGACGAT 1369 Query 14235 TCAGCCACGCGGGGAGC-TGCCATTGCTGGAGCGTCCGTTCGTGCTTGGCCACTTCGATT 14293 |||| |||| || |||| |||| |||| ||||| || | |||| || || | Sbjct 1368 CACGCCA-ACGGGCCGCACGCCACTGCTCAAGCGCCCGTTTGTACATGGCGCCTGGGACT 1310 Query 14294 GCTGG--GGTCTG 14304 | ||| |||||| Sbjct 1309 GTTGGCAGGTCTG 1297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144981712526368