Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02]
39,413 sequences; 107,915,492 total letters
Query= NC_019719.1
Length=41528
Score E
Sequences producing significant alignments: (Bits) Value
seq8567 156 1e-33
seq8566 80.6 7e-11
>seq8567
Length=29384
Score = 156 bits (172), Expect = 1e-33
Identities = 336/493 (68%), Gaps = 12/493 (2%)
Strand=Plus/Minus
Query 12698 GGATGAATGCAATGGCACGCTGACGGCCTGCAAACTCCGATTCGGCGAAAATAACGAACT 12757
|||| ||||||| ||| ||| || ||||||| | ||||||||||| | ||||||||
Sbjct 1793 GGATCAATGCAAAGGCTGTCTGTCGTCCTGCAAGTTGCGATTCGGCGAGAGCAACGAACT 1734
Query 12758 CTCGTTTGGTGGCTTCCCTGGTACGTCGCTGAT---CAGGAGTTGA-TATGCGTCAGAAA 12813
|| || || || ||||| | ||| || || |||||| ||| ||||| || |
Sbjct 1733 TTCCTTCGGCGGATTCCCCGCCGTGTCCCTCATTGCCAGGAGCTGACCATGCGCAAGCAC 1674
Query 12814 ACCATCGATGCGATTATGGCGCATGCTGCAGCTGAATATCCTCGTGAGTGTTGTGGCGTG 12873
| || | ||||| ||||||||| ||||| || ||||| ||||| || || ||
Sbjct 1673 ATAATTGCGGCGATCCAGGCGCATGCGGCAGCGGAGTATCCGAAAGAGTGCTGCGGGCTG 1614
Query 12874 GTG-GCGCAAAAGAGCCGGGTAGAGAAATATTTTCCATGTAGTAACCTCGCTACCGAGCC 12932
|| || || | |||| |||| || || ||||| | ||| |||| || |||||
Sbjct 1613 CTGCTGGCTGTAG-GGCGGGCGCAGAAGTACTTCCCATGCCGGAACATCGCCACGGAGCC 1555
Query 12933 GACAGAACATTTTCACCTGTCTCCAGAAGACTATGCAGCTGCTGAGGACTGGGGTACGGT 12992
|| ||| | |||| || ||| || ||||| || || || |||||| ||| |||
Sbjct 1554 GAACGAAGAGTTTCGACTTGATCCTGAGGACTACGCTGCAGCGGAGGACCTGGGCGAGGT 1495
Query 12993 GATCGCCATCGTTCACAGTCACCCTGACGCCACAACGCAGCCG--AGCGAACTGGATAAA 13050
||||| ||| || ||| ||||| |||||||| | | |||| | || || ||
Sbjct 1494 GATCGGCATTGTCCACTCGCACCCGGACGCCACCAGCCGGCCGTCACCGCAC--GACTTG 1437
Query 13051 GCGCAATGCGACGCAACGCTTTTACCCTGGCATATTGTGAGCTGGCCGGAGGGGGATTTA 13110
|| || || | ||| || |||||||| ||| || ||||| |||||||||||
Sbjct 1436 GCCATGTGTGAGGTCACGGCCTTGCCCTGGCACATTCTGTCGTGGCCCGAGGGGGATTTG 1377
Query 13111 CGCACCATCCAGCC-GCGCGGAGAACTGCCACTGCTGGAGCGTCCGTTTGTGCTTGGACA 13169
|| || ||| ||| || | | || ||||||||| |||| |||||||| | |||
Sbjct 1376 CGGACGATCACGCCAACGGGCCGCAC-GCCACTGCTCAAGCGCCCGTTTGTACATGGCGC 1318
Query 13170 CTTCGACTGCTGG 13182
|| ||||| |||
Sbjct 1317 CTGGGACTGTTGG 1305
>seq8566
Length=6269
Score = 80.6 bits (88), Expect = 7e-11
Identities = 75/93 (81%), Gaps = 2/93 (2%)
Strand=Plus/Minus
Query 15099 AAGATCGGCGACACGATGATGCT-GCAGAGCTTCACCGAGGTGATTGACGCCAAACTGCG 15157
|| ||| |||||||||| | | || | ||||||| | |||||| |||||||| ||||
Sbjct 3810 AAAATCTCCGACACGATGCAGATCGCCG-GCTTCACGGGGGTGATCGACGCCAAGTTGCG 3752
Query 15158 CTACCCGAACACCGCGCTGCTCTACGTCGAATT 15190
||||||||||||||| |||||||| |||| ||
Sbjct 3751 GTACCCGAACACCGCGTTGCTCTACATCGAGTT 3719
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 132705860675940
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |