Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_019927.1 Length=47611 Score E Sequences producing significant alignments: (Bits) Value seq8567 165 2e-36 >seq8567 Length=29384 Score = 165 bits (182), Expect = 2e-36 Identities = 527/801 (66%), Gaps = 20/801 (2%) Strand=Plus/Minus Query 29506 GGACAGTGCTTGGCCAGGCTGAAGAGGTAATGATGCGTGCCGGCGGATGGCAAAAGGCCC 29565 |||| || || |||||||| || ||||| | | || || ||||| ||||| || || | Sbjct 17185 GGACCGTCCTGGGCCAGGCCGAGCAGGTAGCGTTTCGCGCGGGCGGTTGGCAGAAAGCTC 17126 Query 29566 GAATGGAACAGCAGATGAATGAGTGGTTCGGGCACAAGCCGGACTTCATCATCACGCTGG 29625 | |||||||| |||||| ||| |||||||| | ||||| ||||||||||| ||| Sbjct 17125 GGATGGAACAACAGATGCGTGATTGGTTCGGCGATGTGCCGGCTTTCATCATCACCTTGG 17066 Query 29626 CTGCTGACTATTGCCTGCAATGCTCCGATTTAGACTTCTGCGCACTGGTAGAGCATGAGC 29685 |||| ||||| ||| ||| ||| ||| |||| |||||||| ||| | ||||| |||| Sbjct 17065 CTGCCGACTACTGCGCGCAGTGCAGCGACCTAGAGTTCTGCGCTCTGATCGAGCACGAGC 17006 Query 29686 TTTATCACATCGCCCAAGAAGTGGATGAGTTTGGCTCACCGAAGTTTTACCGCGACTCAG 29745 | |||||| | || || | || | | || ||| | | || ||| | | | | Sbjct 17005 TGTATCACCTGGCTCACGCGACCGACAAATACGG-TCAACCAGCATTCACC-CAAGAC-G 16949 Query 29746 GTAAGCCGAAGCTTTGCATGCGCGGACATGATGTTGAGGAATTCGTTGGCGTTGTCCGTC 29805 | ||||||| | ||| || || || || || || ||||| || |||||||| | Sbjct 16948 GCTCGCCGAAGATCAAGCTGCAGGGCCACGACGTAGAAGAGTTCGTCGGTGTTGTCCGCC 16889 Query 29806 GATATGGCGCAAGCGCTGATGTCCAGGAATTAGTAGATGCGGCAAATAAACCAGCAGAGG 29865 | || || || ||| |||| || || | || |||||||| ||||| | || || |||| Sbjct 16888 GCTACGGTGCGAGCCCTGACGTTCAAGCGTTGGTAGATGCTGCAAAAAGTCCTGCTGAGG 16829 Query 29866 TGGCCCATCTTGATGTTGCCAGAGCATGTGGTACATGCCTCATGAAGCTGGCGT-AAACC 29924 ||| | | | |||| || || || || || || || | ||| ||| | | || Sbjct 16828 TGGGGAAATTGAACATTGCGAGGGCCTGCGGAACCTGTCTGCTCAAGTCGGCCTGATTCC 16769 Query 29925 TTTATTAACATTGTCATGGAGGA-AACC-GATGGCAGCATTATCGACAGAGGTTAAATCC 29982 | | |||| | ||| || |||| ||||||| | || | ||||| ||| || Sbjct 16768 ATGACAGGTATTG--ACGGATGACAACCATATGGCAGTACTACGAAGCGAGGTCAAAGCC 16711 Query 29983 TTCATCGTCCAGTCATTGGCTTGCTATGAGCCACCCACAAAAGTAATTG-AGCTTGTAAA 30041 |||||||| ||| | |||| |||| || | || | | || | | ||| || || Sbjct 16710 TTCATCGTTCAGGCTCTGGCCTGCTTCGATACGCCATCCCAGGTGGTAGCAGC-GGTCAA 16652 Query 30042 GGCTGAGTTCAATGTGGAGGTATCGCGCCAGCAAATATCTCAATAC---TGCCCTGGTAA 30098 | | || ||| | ||| | | |||||||| || | || || | || | || Sbjct 16651 GACAGAATTCGGGATTGAGATCACCCGCCAGCA---ATGTGAA-ACGCACGACCCGACAA 16596 Query 30099 CGCGATGGCAG--AGAAGCTCAGCCAGAAGTGGGTAGATCTCTTTAATAGCACTCGCTTG 30156 | || | | |||||||| || ||| ||||| || || || | ||||| | Sbjct 16595 AG-TTTGCCGGGCAGAAGCTCGGCAAGACCTGGGTGGACCTGTTCCACGCTGCTCGCAAG 16537 Query 30157 CGATTCCAGACGGAAATATCTGATATTCCGATTGCTAACAAAGCTTACCGGCTTCGCGCG 30216 ||||||| || | | | ||||| || ||||| || || ||||| ||||||| Sbjct 16536 CGATTCCGTGAAGAGACAACCGATATCCCCATTGCCAATCGTGCGTACCGACTTCGCGGC 16477 Query 30217 CTGGACAGAATGGCGGCAAATACTGAGAAGATGCGCAACTTCGCGCTTACTGCTCAGTTA 30276 || | | |||| | || | ||||| ||||||||| | ||||| ||||| ||| | Sbjct 16476 CTTGGGCGGCTGGCCGAGAAGGCCGAGAACATGCGCAACCTGGCGCTGACTGCCCAGCTT 16417 Query 30277 ATTGAACAGGCTGCTAAAGAG 30297 || || || || |||||| Sbjct 16416 TACGAGCAAGCAGCCAAAGAG 16396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152162350203338