Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq2393 109 4e-18 >seq2393 Length=4323 Score = 109 bits (120), Expect = 4e-18 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 || || ||||| || || ||||| ||| || || | || || ||||| ||||| Sbjct 1935 CGCAGGCGGAGAACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCCAGAGTC 1994 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 ||| |||||| | ||||| || ||||| || || ||||| || || || || || || Sbjct 1995 CTGCCATCTTCTAACTGCTTGCCTGCAAAGATGAGTCGTTGCTGGTCCGGCGGGATCCCC 2054 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGT-GTGTGAAGTTTCAAG 480730 |||||||| |||||||| || ||| ||| || |||||| | | | | | |||| Sbjct 2055 TCCTTGTCCTGAATCTTCGACTTCACATTTTCGATGGTATCATTCGACTCCACCT-CAAG 2113 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||||| || || ||||||||||||||||| || || Sbjct 2114 AGTAATAGTCTTGCCTGTGAGAGTCTTAACGAAGATCTG 2152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3266488585198124