Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_020488.1 Length=38682 Score E Sequences producing significant alignments: (Bits) Value seq36294 147 5e-31 >seq36294 Length=49020 Score = 147 bits (162), Expect = 5e-31 Identities = 191/264 (72%), Gaps = 0/264 (0%) Strand=Plus/Minus Query 25828 CCACTTGCGCGTGCGCAACTTGCCTTCAATGTAAAGCTTTGAGCCTTTGCGTGTGTACTC 25887 ||||| ||| || ||| ||||||||| ||||| | || || |||||||| ||| || Sbjct 39140 CCACTCGCGGGTTTGCAGCTTGCCTTCGATGTAGACCTGCGAACCTTTGCGCAGGTATTC 39081 Query 25888 GCCGGCCACCTCTGCCAACTTCCCGTATAACACAACACGGTGCCACTCTGTTTTTTCTAC 25947 ||||| | |||||| | ||| ||| | | | ||||||||||| || ||||| || || Sbjct 39080 ACCGGCGATCTCTGCAACCTTGCCGAACATCGACACACGGTGCCATTCGGTTTTCTCGAC 39021 Query 25948 CGGCTGCCCTGTCTGCTTGTCTTTGTACTGCTCACTGGTGGCAATGCTTAAATTTGCCAC 26007 | ||| || || |||||||| | ||||||| ||||| || | || | || | ||| Sbjct 39020 CTTCTGGCCGGTTTGCTTGTCGGTCCACTGCTCGCTGGTCGCCAGACTCAGGTTGGTCAC 38961 Query 26008 GGCGGTACCGTTAGGCATATACCTAACTTCCGGGTCCTGGCCTAAGTTGCCGACAATGAT 26067 ||| ||||||| |||| || | |||||| || |||||||| | | ||||| | || Sbjct 38960 GGCATTACCGTTCGGCAAGTAGCGAACTTCGGGATCCTGGCCGCATGTACCGACCAATAT 38901 Query 26068 TACCTTGTTAATTCCGCGTGCCAT 26091 || ||||||| || || ||||| Sbjct 38900 GACTTTGTTAACCCCACGGGCCAT 38877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123602923113064