Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_021306.1 Length=75736 Score E Sequences producing significant alignments: (Bits) Value seq23244 224 5e-54 >seq23244 Length=7436 Score = 224 bits (248), Expect = 5e-54 Identities = 411/600 (69%), Gaps = 9/600 (2%) Strand=Plus/Minus Query 65269 GCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCT 65328 ||| || || || | ||| |||| |||| || |||||||| || ||||| || || Sbjct 7431 GCTGGGCGTCAACGTTGACGACCTGCTGGTTTCGCAACCGGACACCGGTGAGCAAGCGCT 7372 Query 65329 GGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGT 65388 ||| ||| ||| | || || || || | | | |||| || ||||| || Sbjct 7371 GGAAATCACCGACATGCTGGTGCGCTCCAACGCCATCGACGTGATCGTGGTCGACTCCGT 7312 Query 65389 GGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCT 65448 ||| |||||||| || || || |||||||||| || || |||| ||||| ||||| Sbjct 7311 GGCAGCCCTGGTACCCAAGGCTGAAATCGAAGGCGAAATGGGCGACATGCACGTGGGCCT 7252 Query 65449 GCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAA 65508 || || ||| | ||||| |||||| |||| || ||||||| | |||| | | |||| Sbjct 7251 TCAAGCCCGCTTGATGTCCCAGGCCCTGCGTAAAATCACCGGTAACATCAAGAACGCCAA 7192 Query 65509 CACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCC 65568 | ||| | ||| |||||||| | || |||||||||| || | | |||| Sbjct 7191 CTGCCTGGTGATCTTCATCAACCAGATCCGGATGAAGATCGGCGTGATGTTCGGCAGCCC 7132 Query 65569 GAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGT 65628 | || |||||||| || || || || ||| ||||||||| || ||||| |||| | Sbjct 7131 G---GAAACCACCACCGGTGGTAACGCGCTGAAGTTCTACGCTTCGGTCCGTCTGGACAT 7075 Query 65629 CCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAA 65688 |||||| | || | | | ||||||||| || |||| |||||| | | ||||| || || Sbjct 7074 CCGTCGTACCGGCGCGGTGAAGGAAGGTGACGAGGTTGTCGGTAGCGAAACCCGCGTTAA 7015 Query 65689 GGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGG 65748 ||||| ||||||||| ||||||||||| ||| | ||||||||| | | ||||| Sbjct 7014 AGTCGTGAAGAACAAGGTGGCCCCGCCGTTCCGTCAGGCCGAGTTCCAGATTCTCTACGG 6955 Query 65749 GGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAA 65808 |||| |||| | | | ||| | ||||||||| |||| ||| || | || | Sbjct 6954 CAAGGGTATCTACCTGAACGGCGAGATGATCGACCTGGGCGTGCTGCACGGTTTCGTCGA 6895 Query 65809 GAAGTCGGGCGCCTGGT---TCAAGTACGGGGACAAGAACGTCGCTCAGGGCAAGCCCAA 65865 ||| || || ||||||| | | |||| ||||| ||| ||||||||| |||| Sbjct 6894 GAAATCCGGTGCCTGGTATGCCTACAACGGCAGCAAGA---TCGGCCAGGGCAAGGCCAA 6838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242114045611421