Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq24895 277 3e-69 seq39020 111 3e-19 >seq24895 Length=15594 Score = 277 bits (306), Expect = 3e-69 Identities = 314/416 (75%), Gaps = 4/416 (1%) Strand=Plus/Plus Query 35465 CTGGCCCTGGTATTTACCGCCGCGATCCTTGTACGAGATTTCGCAGTCCTCGTCACTCTC 35524 ||||||||| || || ||||| || ||||| || || | |||||| || ||||| || Sbjct 3598 CTGGCCCTGATACTTGCCGCCACGGTCCTTATAGGACACTTCGCACTCTTCGTCGGATTC 3657 Query 35525 GAAAAACAGCATCTGCGCCACACCTTCGTTCGCGTACACACGCGCCGGCAGGTTGGTAGT 35584 ||| ||||||||||||||||| |||||||| ||||| | ||||||| | |||| || Sbjct 3658 GAAGAACAGCATCTGCGCCACGCCTTCGTTGGCGTAGATTTTTGCCGGCAAGGTGGTGGT 3717 Query 35585 GTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCGGCGTCACGTTGAC 35644 |||| ||||||||| || || || |||||||| || || |||||||||||||||||||| Sbjct 3718 GTTGGAGAACTCCAGGGTGACGTGCCCTTCCCATTCCGGCTCCAGCGGCGTCACGTTGAC 3777 Query 35645 GATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGAGGACGTTGCGCGG 35704 |||||| || ||||||||||||||||| || |||| || | ||||| || ||||| Sbjct 3778 GATGATGCCGCAGCGCGCGTAGGTGCTTTTGCCCAGGCAGATAGTCAGGACATTACGCGG 3837 Query 35705 AATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCTGTTCGGCGGAATCAGGATGCT 35764 || |||||| ||||||| ||||| ||||| || ||| ||| ||||| || | | | Sbjct 3838 GATACGGAAGAATTCGACGGTGCGCGCCAGGGCAAAGGAGTTTGGCGGGATGATGCAGAC 3897 Query 35765 GTCAGCCTTAACCGGCTGC-AGGCACTTGGGATCGAAGTTCTTCGGATCAACCACTGCGC 35823 ||| ||| | || | | | || || |||||||| |||||||| || ||| Sbjct 3898 GTCGCTCTTGA-CGTCGACGAAGCTTTTTTCGTCGAAGTTTTTCGGATCGACGGTTGCCG 3956 Query 35824 TGTTGATGTTGGTGAAGACTTCCCACTCATCGGCAGCA-CGCACGTCATAACCATA 35878 ||||||||||||||| || | |||||||||| ||| || ||||| || || || Sbjct 3957 AGTTGATGTTGGTGAACACCTTGAACTCATCGGC-GCAGCGTACGTCGTAGCCGTA 4011 >seq39020 Length=23788 Score = 111 bits (122), Expect = 3e-19 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 247003 GTGCCAGACGTGCGATGATTTCGGAGTTCATGCTGCGATGGTGCGTACGGGCAACGTCCG 247062 || |||| ||||||||||||||||||||||||||||| || || | || || || || | Sbjct 14714 GTTCCAGGCGTGCGATGATTTCGGAGTTCATGCTGCGGTGATGATTGCGAGCCACCTCGG 14655 Query 247063 CGATGCGTTCGCGCATGCCATCCGGCAAACGCACGACAAACTTGTCGGCGCTGCGGCTG 247121 | |||||||| ||||| || || |||| ||| ||||| |||||||| || | |||||| Sbjct 14654 CAATGCGTTCCCGCATTCCGTCTGGCAGACGTACGACGAACTTGTCAGCCGTACGGCTG 14596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 825509901764520