Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_022749.1 Length=39758 Score E Sequences producing significant alignments: (Bits) Value seq767 300 4e-77 >seq767 Length=1236 Score = 300 bits (332), Expect = 4e-77 Identities = 374/509 (73%), Gaps = 4/509 (1%) Strand=Plus/Plus Query 18571 TGAATCGCCACAGATAATCTAGACACT-TCCGAGC-CGCTGATAATATTGGTTTTCGTAT 18628 ||||||||| | | | |||||||||| ||| ||| ||||| || | ||||| | Sbjct 6 TGAATCGCCCCGGGTTTTCTAGACACTCTCCAAGCTCGCTGTG--TAACGCTTTTCAAAC 63 Query 18629 TCAGTTGGTGGCATATGATCACTCGAACCATGCCGACGCTTACTGTTATAAAACATTTCG 18688 || |||| || |||| | ||||||| || || || ||| |||||||| ||| Sbjct 64 TCTACCGGTGACAGTTGATTGTTGAAACCATGACGTCGTTTTGGGTTGTAAAACATCTCG 123 Query 18689 ATGTAATCAAAAATATCACCGCGAGCTTCTTCTCGCGTTCCGTAGATCTTTTTCTTTATC 18748 |||||||| || | ||| || ||||| |||| ||||| |||||| ||| |||| || Sbjct 124 ATGTAATCGAATACATCCCCACGAGCATCTTGCCGCGTGGTGTAGATTTTTCTCTTGATT 183 Query 18749 CGTTCACGTTTCAGTAGCTGGAAAAAACTTTCTGCGACTGCGTTGTCATGACAGTTACCG 18808 ||||| |||||||| |||||||||||||| || || || |||||||| || |||||||| Sbjct 184 CGTTCCCGTTTCAGCAGCTGGAAAAAACTCTCAGCTACGGCGTTGTCGTGGCAGTTACCT 243 Query 18809 CGACGGCTCATACTGCCCTCCAGCCCGTGTGATTTCAGGAACGACTGCCACTCATAGCTT 18868 ||||||||||| ||| | |||| || | || | || |||| ||| |||| Sbjct 244 CGACGGCTCATGCTGGCGACCAGGTTGTTGGCCTTTAAAAAGCTGCGCCAATCAGAGCTG 303 Query 18869 GTGTACTGACTGCCTTGATCAGAATGAACCAGCACCTGCTTTTGAGGATTACGTCGCCAC 18928 ||||||| ||||| |||||||| |||| || || | || | || ||||| | |||| Sbjct 304 CTGTACTGGCTGCCCTGATCAGAGTGAATCATTACTTCCTGCTTCGGCTTACGCCTCCAC 363 Query 18929 ACGGCCATCAGAAGTGCATTCAGGACAATATCCTTTGTCATCCGGGGCTGCATTGACCAG 18988 || ||||| || ||||||| | | | | || | ||||| | | || |||||||||| Sbjct 364 ACCGCCATTAGCAGTGCATCGATGGCCAAGTCGCTCGTCATTTGTGACTTCATTGACCAG 423 Query 18989 CCAATAACTTTGCGCGAGAACAGGTCAACAACCACAGCCAGATACAGCCAGCCTTCGTGA 19048 |||| |||| ||| || ||||| || | ||||| |||| ||||||||||||||| | Sbjct 424 CCAACGACTTGGCGTGAAAACAGATCGAGCACCACGGCCAAATACAGCCAGCCTTCATAT 483 Query 19049 GTCCGGATGTAGGTGATGTCCGTTACCCA 19077 || ||||||||||||||||| || ||||| Sbjct 484 GTTCGGATGTAGGTGATGTCGGTGACCCA 512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127044511594320