Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_023610.1 Length=218339 Score E Sequences producing significant alignments: (Bits) Value seq16947 111 2e-19 >seq16947 Length=20940 Score = 111 bits (122), Expect = 2e-19 Identities = 226/325 (70%), Gaps = 13/325 (4%) Strand=Plus/Minus Query 99860 CCAAAACCACCTGCGCCGCGTTCAGTTTCCGTACTGAACTCATCCACCTGTTTGAACAGA 99919 || || |||||||||||||||| ||||| || |||||| || ||| | | ||| | Sbjct 18211 CCGAAGCCACCTGCGCCGCGTTGTGTTTC-GTC--GAACTCTTCGACCAGCTCGAAGTGC 18155 Query 99920 CCCATCACCACCGGTTGAATCAGGTATTGCGCAATACGGTCGCC-ACGAGAGATTTTAAA 99978 || |||||||||| | | | ||| ||||| || ||||| ||| | ||| || || Sbjct 18154 GCCTGCACCACCGGTACCAGTACGAGTTGGGCAATGCGCTCGCCGACG-GCGATATTGAA 18096 Query 99979 CGCAGGTCCCTGAGTGTTACGGTTCCA-CAGTGAAACCATCAGCTGCCCGTTGTAGTCTG 100037 ||| |||| || | ||||||||| ||| || ||||||| || || | |||||| | Sbjct 18095 CGC-GGTC--TG---GCCACGGTTCCAGCAG-GACACCATCAACTCGCCCTGGTAGTCCG 18043 Query 100038 CATCAATGACGCCCGTCAGGTTACCCAGTACGATACCGTGTTTGTGACCCAGACCGGAGC 100097 || || | ||| |||||| || || ||||| ||||||||||| ||||| ||||||| Sbjct 18042 AGTCGATCAGCCCCACCAGGTTGCCGAGGACGATGCCGTGTTTGTGGCCCAGGCCGGAGC 17983 Query 100098 GAGGGTGAATCAATCCCACGTAGTTTGGATTCTTCAGGAAGAATGCCAGACCGGTTGGAA 100157 | || | |||| || | | || | || | ||| | ||| ||||| |||| Sbjct 17982 GCGGCAGGATCAGCGCCGCCAGGCCCGGGTCGCCCACGTAGATCGACAGGCCGGTCGGAA 17923 Query 100158 TCAGTTTTGTTTCGCCAGGTTCGAG 100182 |||| | || | ||| ||||| || Sbjct 17922 TCAGAATGGTCTGGCCTGGTTCAAG 17898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 698212647260520