Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_023738.1 Length=106327 Score E Sequences producing significant alignments: (Bits) Value seq17687 114 9e-21 >seq17687 Length=17369 Score = 114 bits (126), Expect = 9e-21 Identities = 231/336 (69%), Gaps = 15/336 (4%) Strand=Plus/Plus Query 94435 TCGGAGACGAACGCGCCCTGTATCCGGAT-GGCG--CTGCGCGCCCCCACCGGCAGGAAT 94491 ||||||||||||||||| || | ||||| ||| ||| | ||| ||||| | | Sbjct 5485 TCGGAGACGAACGCGCCGTGGACACGGATCGGCAAACTG---GTGCCCGGCGGCATGTAG 5541 Query 94492 AACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTCGTCCAGGATCACCCGGCTA 94551 | | |||||| |||| || |||||||| ||||||| ||| | ||| |||| | Sbjct 5542 AGCATGTCACCGTGGCCCAGCAGTTGCTCGGCGCCGCCCTGGTCGATGATGGTCCGGGAA 5601 Query 94552 TCGGTGAGG---GACGCTGTGGCGAACGACAGCCGCGAGGGCACGTTGCTCTTGATGAGG 94608 ||| | | ||| | ||| |||| || || | || | |||| |||||| ||| Sbjct 5602 TCGATCTTGCTCGACACC-TGG--AACGCCATGCGGGTCGGGATGTTGGCCTTGATCAGG 5658 Query 94609 CCCGTCACCACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATGCCGGCCGCA 94668 || || | ||| ||||| || || ||||| ||||| |||| | || || ||||| || Sbjct 5659 CCGGTGATCACGTCCACCGACGGACGCTGGGTCGCGAGGATCAAGTGGATCCCGGCGGCC 5718 Query 94669 CGCGCCTTCTGCGCGATGCGGACAATGTTGGCCTCAACCTCTTTCTTGTAGCCACCCATC 94728 ||||||||||| ||||| ||| | || | || ||| |||||| | | |||| Sbjct 5719 CGCGCCTTCTGGGCGATACGGGCGATCAGCTCTTCGACC---TTCTTGCCGACGATCATC 5775 Query 94729 ATGAGGTCCGCGAGTTCATCCACCACTACCACGATG 94764 || | ||| || | ||| || ||||| ||||||||| Sbjct 5776 ATCATGTCGGCAAATTCGTCGACCACCACCACGATG 5811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339958223971184