Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_024330.1 Length=37380 Score E Sequences producing significant alignments: (Bits) Value seq8416 407 4e-109 seq8567 161 2e-35 >seq8416 Length=35894 Score = 407 bits (450), Expect = 4e-109 Identities = 1073/1619 (66%), Gaps = 68/1619 (4%) Strand=Plus/Plus Query 175 ATCCAGCGGCCTGACCATACGACGCGCCCGATAATGTCGATTGCTTCCAAGTCTTGCTTA 234 ||||| | ||| | ||| || || || || | ||| || | | | || || || ||| Sbjct 255 ATCCAACCGCCCGCCCAAACAACACGTCCCACAATCTCTAGGTCATTCAGGTTTTCTTTA 314 Query 235 GACACGAACATTGTCTGATAGGCCGGATTAGCACTGATGATCGCCAGGCCGCCATTGATC 294 || || ||| |||||||| |||| || || ||||| | || | ||| || ||| Sbjct 315 GAAACCTTCATGGTCTGATAAGCCGCGTTTGCGCTGATAACTGCTACGCCACCGCCAATC 374 Query 295 TGCCGCTGGACGCGCTTGGCGTACAAGTGGTCATCCAGGCGGATGACGTAGACAGCGTCG 354 || || || | ||||||||||||| |||||||||| ||| || ||||||| || || Sbjct 375 TGGCGTTGCAGCCGCTTGGCGTACAGATGGTCATCCAAGCGAATAACGTAGATGGCTTCC 434 Query 355 TCA-CGAACCTCATTGCAACTGTGGTCAATCATCACCGTATCGCCATCGCTCAACAGTGG 413 | | | || |||| ||||||||| |||| ||| || |||||||| |||| || Sbjct 435 CCTTCCAGGCTG-TTGCGACTGTGGTCGATCAACACAGTGTCGCCATCACTCAGCACCCC 493 Query 414 CTCCATTGAGTCACCGCCGATGCGGACGGCCGACATATTCGCGATCTCCAGGCCTTGCTT 473 |||||| ||||||||| | | |||| ||||| | |||| ||||| || ||||| Sbjct 494 CTCCATAGAGTCACCGTCCACCCGGATAGCCGAGAGCTTCGACGGCTCCAATCCCTGCTT 553 Query 474 CCGCAAGCTGTAGCGAGTGAATGCCAACTGAGCGAGTATCTGCGCCCCCTCTGTCCAGGA 533 ||||| ||| || || |||| || | || | | | |||||||||||||| | Sbjct 554 GCGCAATGAGTAAGTGGTAAAAGCCAGGTGCGTAAGAACCCGAGCCCCCTCTGTCCATGC 613 Query 534 GCCGTGACCAGCGCTCACCCGAGCGTCATACAGAGGGATATAGGCGTAATTGTCGTCTCC 593 |||||||| || || |||||||| || || |||| |||| ||| ||||| || Sbjct 614 CCCGTGACCGGCACTGCAACGAGCGTCGTAAAGGGGGACATAGCTGTATTTGTCATC--- 670 Query 594 CTTCTCGCGACTATCTTCCGCAGGTATAGGGGTGC----CGAAAGCCAGCCACATAGCGG 649 ||| | || | ||||| | | ||| ||| |||| ||||||||||| || | Sbjct 671 ---CTC---AATAACAAGCGCAG-TCTGGGGCTGCTCACCGAACGCCAGCCACATCGCCG 723 Query 650 AAGTCCCTGCGGCCTGGGCGATCTGCTCAAGTCGATCCAAGGTTGGGAAAGTCTCCCCCG 709 | | || |||||||| |||||||| || | || | || || | ||||| || Sbjct 724 ACACATCAGCCGCCTGGGCAATCTGCTCCAGCCTGTCGAGAGTAGGATACGTCTCTCCGC 783 Query 710 ACAGATAACTGCGCAGGGTCGCCTCGGACAAGCCGCATTCCTTAGAAAATCCTCGCAA-G 768 |||||||||||| | | | |||| || | || | || | ||| | ||| | Sbjct 784 TCAGATAACTGCGTATAGCCCCCTCAGAAAGGCTTGAGTCGCGCGCAAAAACGCGCGCCG 843 Query 769 CTATGCGAGGAAATCGCCTGCTTCAGACGGATTTT---GAAGTATCCGATTCCATCCTGA 825 || | | ||||| | ||| || | ||| ||| |||||||| | || Sbjct 844 CTCTA-GTCCCCATCGCTTCCTTAAGTC---TTTCACGGAAACATCCGATTGCCCCCGAT 899 Query 826 GGAATCGGATGCCCAGACAATTCAG--TCGGTGCGCCATCCGTTTGTTCGTAACCCATTG 883 |||||||||||| | | || || || ||||| || | |||| ||||| Sbjct 900 GGAATCGGATGCTGCGTTCCTGAAGCATCCGTTTT--ATCCGATTCCTTGTAAGTCATTG 957 Query 884 ATTTTCCTAGT---ATTCATAGTTTTTCTGCGCACGGGTGCGAAGAAAAACTAAACGGAT 940 |||| || || |||||| ||||| | || || || | ||||| || ||||| Sbjct 958 ATTTATCTCGTTCTATTCAT---TTTTCCGAGCGCGCCA-CGCATAAAAAAGAATCGGAT 1013 Query 941 GAGTGGAAATCCG-TTGATGTGCGAGGATTTTCTCGCTATGTTTATGCCCTAAGTCACGT 999 | | |||| ||||| |||| | | | |||||||||||| | | | |||| Sbjct 1014 GCTCGTTTTTCCGATTGATATGCGCATTTATCCGCGCTATGTTTATCCGCAACAGGACGT 1073 Query 1000 TAGACACCCCaaaaaaaCCACCCTGCACGGTGGTTGAGATGGAACGTAGGCATGAACAGA 1059 ||||| |||||||||||||||| | | ||||| | | || |||| | Sbjct 1074 TAGACGTCCCAAAAAAACCACCCGTGAAGATGGTTCAAA----ACT-----ATGAGCGAT 1124 Query 1060 ACCGAAATACCCCGCGACAACAACGTCCGCTGGGAGTGGATCAAATACCAGCTCCGCGCC 1119 | ||| || ||| ||| | ||| |||||||||||||||||||| ||||||| Sbjct 1125 ATCGACATGCCCACTGACCCTACTAGCCGATGGGAGTGGATCAAATACCAACTCCGCGTA 1184 Query 1120 AGGGGTTCGTCCCTGGCCGAGGTGGCCCGCTCCCTCGACGTATCTAGCCCGGCAGTCAAA 1179 |||| | || |||| || | || || || || || || | ||| || Sbjct 1185 CGGGGCACCTCAATGGCGAAGCTTGCTCGTCAGCTTGAGGTCACTGATCGCGCAATCCGC 1244 Query 1180 AACGCCAAGCTGAATCCCTACCCTCGGGTGGAGCGCGCCATCGCCGCTGTGCTCGACCTC 1239 |||||||| | |||||| || || | || || || | || | || || ||| Sbjct 1245 AACGCCAAAAGCACTCCCTATCCGCGCATCGAACGGTCCCTTGCTGATGCTCTGTGCCTT 1304 Query 1240 -AGCCCCCTGGTGCTGTGGCCTGAGCGCTGGCTCGACGACGAGAATCCGAAGCGGCAACG 1298 |||| | | | ||||| ||||||||| || ||| | | ||| | |||||||| Sbjct 1305 GAGCCTTCCGACA-TCTGGCCAGAGCGCTGGAACGCCGATGGCACTCCACACCGGCAACG 1363 Query 1299 GCCCAATCGTTCGGAAACCCTCAAGGCATATGACAGTGTCATATGCCGATCCGGGAAAAA 1358 ||| || |||||| || | | || ||| | ||| |||| | Sbjct 1364 GCCTGGGCGCGCGGAAATAAACACGTCCTACAACAAGG--ATA-------CCGG-----A 1409 Query 1359 TAACAGATACGCTGACCAAGCGCAGCGTAAAGCCGACGCGGGGGCTTGAACATGGCCCGC 1418 |||||| || | | || ||||||| | | | || |||||||| | Sbjct 1410 CAACAGA--CGGTT-----GGACACTGTAAAGCGGCAAGGAGTGCCTGAACATGCGTAAC 1462 Query 1419 CGCAAAGACGACCGCACCCTGGACATCTTCGATGTTCCGCAGCCAGCTCGCGCTATACCC 1478 | ||||| ||| | || | ||||||||| |||||||||||| | | |||||||| Sbjct 1463 CAAAAAGATGACAGAACATTAGACATCTTCTCTGTTCCGCAGCCGGTGCTTTCTATACCC 1522 Query 1479 GGTGAGTGCAACTACGCCGCCCAGGTCAGCGAGCTGGTCAGCGAAATACTGAAGGCCGCC 1538 ||| | ||||||| |||||||||||||||||||||||||||||| | || || | || Sbjct 1523 GGTCACGGCAACTATGCCGCCCAGGTCAGCGAGCTGGTCAGCGAAGTCCTCAAAGAGTCC 1582 Query 1539 AACCTCGACCGTTACGAGATTGCCGCCCGCATGTCGCGCCTCTCCGGCGATGACGTGAGC 1598 || | ||||| || |||||||| || |||||||| ||||| || ||||| ||||| ||| Sbjct 1583 GACTTGGACCGCTATGAGATTGCGGCTCGCATGTCACGCCTTTCGGGCGACGACGTTAGC 1642 Query 1599 AAGAACATGCTCGACGCCTGGTCGAGTCCCGCCCGAGTTGATCACAACTTGCCTTTCTAC 1658 ||||||||| | ||||||||||| ||||| ||||| | ||||||||| | ||| | || Sbjct 1643 AAGAACATGTTAGACGCCTGGTCAAGTCCTGCCCGTGCAGATCACAACCTACCTCTGTAT 1702 Query 1659 CGCGCCGCCCTCCTGGAAGACGTCTGCGCGAGCCACCTGCTGACCAACTGGCTGGTCGAT 1718 || || || | ||||| || ||||| || ||||| | ||||| || |||| || | Sbjct 1703 CGAGCTGCTTTGCTGGAGGAAGTCTGTGCAAGCCATGTCCTGACGAATTGGCAAGTACAC 1762 Query 1719 GTGCGGGGTGGCCGCGTGGCCTATGGCCGAGACGCACTGCTCGCCGAACTGGGCCGCCT 1777 |||| |||||||| || || ||||| || || || ||| ||| ||| | || ||||| Sbjct 1763 CTGCGCGGTGGCCGGGTCGCTTATGGGCGCGAGGCTCTGGACGCGGAAATAGGTCGCCT 1821 Score = 403 bits (446), Expect = 4e-108 Identities = 898/1335 (67%), Gaps = 27/1335 (2%) Strand=Plus/Plus Query 19492 GACCGCAACACCCCGCTTCAGGACGCCGAGGTCATCGGCGTGCCGGTAGCGGCCAACGTC 19551 || ||||| || || | ||| | ||||||| | | || || || || ||||||||| Sbjct 21216 GATCGCAATACGCCCATGAAGGCCACCGAGGTTCTGGTGGTTCCCGTTGCCGCCAACGTC 21275 Query 19552 CAGGTCTTCGCCGGCGCCATCGTCGTGGCGAACGCTACCGGGTTCGCCGTAGGCGGCAGC 19611 | ||||||| ||| | | || || || ||||| || || || || | | || Sbjct 21276 CGCATCTTCGCGGGCTCTCTGGTAGTCGCTAACGCCACTGGTTTTGCTGCACCTGGTTCA 21335 Query 19612 ACCGCCACCGGCTTGACCTACCTGGGCCGCGCTGAGGAATACGTGGACAACCGCAATGGC 19671 |||||| ||| || ||||||| ||||| || || || | || |||||||| ||| Sbjct 21336 ACCGCCCTGGGCCTGTCCTACCTCGGCCGTGCCGAAGAGTCAGTCGACAACCGTGGCGGC 21395 Query 19672 GCGGACGGCGCCAAGGTC--GTCCGCGTGCGCCGCC-TG--AACGCCTTCAAGTGGGCGA 19726 || | || || | || ||| | | ||||| || || || ||| ||| | | Sbjct 21396 GCAGCTGGTGCT--GCTCAGGTC---GAGATCCGCCATGGCAAGGCATTCCTCTGGACCA 21450 Query 19727 ACGACGGCAGCGTCACCCAGGCGCACCTGATGAAACCCGCCTACATCGTGGACGACCAGA 19786 | ||||||| | ||||||||||| ||||| | || ||||| |||||||| || ||| | | Sbjct 21451 ATGACGGCACCATCACCCAGGCGTACCTGTTCAAGCCCGCTTACATCGTCGATGACGAAA 21510 Query 19787 CCGTCGCCGCCACGGACGGCACCGAAACCCGCTCCCCGGCCGGCCGCATCATCGGCGTCG 19846 |||| || || | || | || ||||| ||| | || || |||||| |||| | | Sbjct 21511 CCGTAGCGGCTGCTGATGCAGGCGGCACCCGATCCACTGCTGGACGCATCGTCGGTATTG 21570 Query 19847 AACCGGACGGCGTGTGGGTGGAATAACAGGCTCACCAAC--GGAGAACCGGACACATGCT 19904 | | ||||||||||||| || |||| ||| | |||| | | |||| | Sbjct 21571 ATACCAACGGCGTGTGGGTTGAGTAACTCCCTCTATATATAGGAGCGCATTGCGCATGTT 21630 Query 19905 GATCAACAAGCAGAGTCTCAACGCGGCATTCGTCGCGATCAAAACCATCTTCAACAACGC 19964 | |||||| || | || ||||| || || | |||||| | ||||||||||| Sbjct 21631 AGTTAACAAGTCCTCGATCCAGGCAGCATTTGTTGCCCTGAAAACCCTTTTCAACAACGC 21690 Query 19965 CTTCGCGGCGGCCCCCACCACCTGGCAGAAGATCGCCATGGAAGTGCCGAGCAACACCAG 20024 ||| ||| | || |||| | ||||| | |||||||||||| | ||||| |||| ||| | Sbjct 21691 CTTTGCGACCGCACCCAGCGCCTGGGAAAAGATCGCCATGAAGGTGCCAAGCACCACTGG 21750 Query 20025 CAGCAACGATTACAAGTGGTTGAGCACCTTTCCGAAGATGCGCCGCTGGATCGGCGCGAA 20084 | |||| || |||| || | ||||| || |||||||| ||| | |||| || Sbjct 21751 CGCCAACATGTATGCGTGGCTGTCGGCGTTTCCAAAAATGCGCCGTTGGGTTGGCGAAAA 21810 Query 20085 GGTGGTCAAGAACCTGAAGGCCTACAAGTACGTTGTCGAGAACGAGGACTTCGAGGCCAC 20144 | || |||| ||| ||||| | || ||| || || ||||| || || || || || Sbjct 21811 GCACGTTAAGAGCCTCAAGGCGTTCAGCTACACCGTAGAAAACGAAGATTTTGAAGCGAC 21870 Query 20145 CGTCGAGGTGGACCGCAACGACATCGAGGACGACCAAATCGGCATCTACTCGCCCCAGGC 20204 ||||| || ||||||||| | ||||| ||||| || | ||||| || |||||||||| Sbjct 21871 TGTCGAAGTTGACCGCAACCATATCGAAGACGATCAGTTGGGCATTTATGCGCCCCAGGC 21930 Query 20205 GAAGATGGCCGGTTACTCGGCGGCTCAGCTCCCGGACGAGCTGGTCTATGAAGCGGTCAA 20264 | | ||||| || | ||| || ||| | ||||| || | || | || ||| || Sbjct 21931 GCAAATGGCAGGCTTCTCAGCAAAGCAGTTGCCGGATGAAATCGTATTCGAGTTGGTGAA 21990 Query 20265 CGGCGCCTTCACCAAGCCCTGTTTCGACGGCCAGTATTTTATCGACACGGATCACCCTGT 20324 ||||| || ||| | || | |||||||||||| || ||||||| || ||| || Sbjct 21991 CGGCGGTTTTGGCAACCTGTGCTACGACGGCCAGTACTTCTTCGACACCGACCACGTCGT 22050 Query 20325 CGGTGATGCCTCGGTGAGCAACAAGGGCACCGCTCCGCTTTCCAACGCCAACCAGGCGGC 20384 ||| || || |||||||| ||||| || ||||||||| | | |||||||| Sbjct 22051 CGGCACTGGTAGCGTCAGCAACAAAGGCACGGCGGCGCTTTCCATTACGACTCAGGCGGC 22110 Query 20385 GGCGAAGGCAGGTTATGGCGCTGCTCGCACTGCGATGAAGAAGTTCAAAGACGAGGAAGG 20444 || |||| | |||||||| || ||||| || ||| |||||||| ||||| || || Sbjct 22111 AGCCAAGGGCAGCTATGGCGCAGCACGCACCGCCATGGGCAAGTTCAAGGACGATGATGG 22170 Query 20445 ACGTTCCCTCAACGTCTCCCCCAAC-GTGCTCCTGGTCGGCCCGGCGCTGGAAGACGTGG 20503 ||| | || | || | |||||| | |||||||||||||| | |||||||| | Sbjct 22171 CCGTCCTCTGGATGT-GCGCCCAACAATCCTCCTGGTCGGCCCAGGTTTGGAAGACACCG 22229 Query 20504 CGAAGATGCTGCTCACCAACCCGAAGCTCGCGGACAACACCCCGAACCCCTACGTCGGCA 20563 | || | |||| || | ||| || |||| |||| || | Sbjct 22230 CCCGCGCCTTGTTGACCAGTGATCGCCTGGAAGACGGCAAGGTCAACCTCTACAAGGGTA 22289 Query 20564 CTGCTGAGCTGGTAG--TGGACGGGCGTATCGAGTCCGACACCGCCTGGTTCCTGCTGGA 20621 |||| ||| |||| | | ||| |||||| ||||| || ||||||||||| ||||| Sbjct 22290 CTGCCGAGTTGGTCGTCTCGAC--TCGTATCACCTCCGATACGGCCTGGTTCCTCCTGGA 22347 Query 20622 CACCACCAAGCCGGTAAAACCGTTCATCTTCCAGCCCAGGAAGCAGCCGGAATTCGTTTC 20681 ||| | |||||| ||| || ||||||| |||| | ||| || | ||||| Sbjct 22348 CACAAGCAAGCCCGTACGCCCCTTCATCTACCAGGAGCGCAAGGCTCCAGTCTTCGTCCA 22407 Query 20682 CCAGGTCAACCTGGATTCGGATGACGTCTTCAACCTGCGCAAG---CTGAAGTTCGGCGC 20738 ||| | | | || | || ||||| |||| |||||| | |||||||| || Sbjct 22408 GCAGACCGATCCCGAAGCTGAAGACGTTTTCA---GTCGCAAGAAATTCAAGTTCGGGGC 22464 Query 20739 CGAAGCCCGCGCTGCTGCCGGTTACGGCTTCTGGCAGCTGGCCTATGGCTCCACCGGCAC 20798 ||||| || || || | ||||| ||||||||||| ||||||| ||||| || ||| Sbjct 22465 AGAAGCACGGGCGGCCGGTGGTTATGGCTTCTGGCAACTGGCCTTCGGCTCGACTGGC-- 22522 Query 20799 TGGCGCATAAGGGGG 20813 | || |||||||| Sbjct 22523 -GAAGCGTAAGGGGG 22536 Score = 149 bits (164), Expect = 1e-31 Identities = 140/174 (80%), Gaps = 7/174 (4%) Strand=Plus/Plus Query 8277 CGGCCAAGAACCGCA--CCGTCCACTGAGCGAAACCGCCCCGGCCTGGCCGGGACGGTCT 8334 |||||| |||| | || | |||| ||||||||||||||||| || | |||||||||| Sbjct 8662 CGGCCAGGAACAACTTGCCCTGCACTAAGCGAAACCGCCCCGGCGTG-CTGGGACGGTCT 8720 Query 8335 GCCGGACGTGGTGGTCCGGTACTGATGAGCAGCCACCCATGACGAACGAA--ACCAAGAC 8392 |||||||||||| |||||||||||||||||||||||||||||| ||||| ||| | || Sbjct 8721 GCCGGACGTGGTTGTCCGGTACTGATGAGCAGCCACCCATGACAGACGAAACACCCAAAC 8780 Query 8393 GGACCGCCAGCGCCGCCTGGCGCGAGAACGCCAACGGGCGAAGCGCGAGCGCGA 8446 | ||||| ||||||||| || ||||| |||| || |||| ||||||| Sbjct 8781 --AGCGCCAAACCCGCCTGGCACGCGAACGTAAACGTGCCCAGCGTAAGCGCGA 8832 Score = 122 bits (134), Expect = 2e-23 Identities = 316/473 (67%), Gaps = 29/473 (6%) Strand=Plus/Plus Query 2756 GCATGAAATCAAGGCGCTGCGCCCGTTCATTCGCCGCGACTTCACCAAGCTACT---CCC 2812 ||| ||| |||| || |||| || |||| |||||| | ||||||| | ||| Sbjct 2615 GCAGGAACTCAAAGCCCTGCAACCATTCAAGCGCCGC---TCCACCAAGAGCATGTACCC 2671 Query 2813 GACCGACGTCTATTCCTGCGACGGCCACACGTTCGACGCCGAGGTCCAACACCCGCTGCA 2872 | |||||| | || ||||||||||| ||| || || ||||| |||| | ||| Sbjct 2672 GTGCGACGTATTCACCGCCGACGGCCACAAGTTTGATGCAGAGGTATTGAACCCAC-GCA 2730 Query 2873 C-GGCCGGCCCTTCCGGCCGGAAATCACCACCATCATAGATATCCGTACCCGTCGAATTC 2931 | ||| ||| | ||| |||||| |||||| || | ||| || ||| || || | Sbjct 2731 CCGGCAAGCCTTACCGCCCGGAAGCAACCACCGTCCTCGATGTCGCTACTCGC--AAGGC 2788 Query 2932 CG--GGATGGTCCACCGGCCTGGCCGAGTCGGCCCTGGTGGTGGTCGATGCCCTGCGCGA 2989 || || |||| || ||||||||| || | | || | || |||||||| || Sbjct 2789 CGTGGGTATTTCCATTGGTGAGGCCGAGTCCACCATCGGCGTTATGGACGCCCTGCGTGA 2848 Query 2990 CGCC-TGCACCAAGGGCGGCATTCCGGCCATCTTCTACGTGGACAACGGCTCGGGCTACA 3048 |||| |||| || |||||| || | |||||||| |||||||| || |||| Sbjct 2849 CGCCATGCAGCA----CGGCATGTTTGCGGTGTTCTACGTTGACAACGGTTCCGGCTTTG 2904 Query 3049 TCAACCACATGATGCGCGACGAGGCGGTCGGCCTTATGGGCCGCCTGGGCATCGATATGA 3108 |||| ||| | || || | | ||| || | | ||| |||| ||||| Sbjct 2905 CCAACGACACCGTACGTGAAGTAG---TCGACCGTCTCGGC------GGCAC---TATGA 2952 Query 3109 AGAACAGCCTGCCCTACAACAGCCAGGCGCGGGGCGTGATTGAGCGCGTCCACCAGAGCC 3168 | | ||||||||||||||||||| || ||| | |||||||| |||||| | Sbjct 2953 CCCATGCCTTGCCCTACAACAGCCAGGCCCGCGGCCTCATTGAGCGTTCCCACCAAACGA 3012 Query 3169 TGTGGATTCGGGCCGCCAAGGAACTGCCCGGCTACATCGGCGCCGACATGGAC 3221 | ||| | || |||||| | ||| || ||||||||||||||||||||||| Sbjct 3013 TTTGGGTCAATGCAGCCAAGAAGCTGACCAGCTACATCGGCGCCGACATGGAC 3065 Score = 118 bits (130), Expect = 3e-22 Identities = 223/322 (69%), Gaps = 11/322 (3%) Strand=Plus/Plus Query 8693 AAAATCCACATCGCCAAGGCCCAGCTGGGCATGGACGATGACACCTATCGCGCATTGCTG 8752 || ||||||||||||||| | || || |||| ||||| ||||| ||||| ||| || Sbjct 9061 AAGATCCACATCGCCAAGAAGGACCTTGGGCTGGATGATGAAACCTACCGCGCCTTGTTG 9120 Query 8753 GCTCGCGTCGCGGGCGTGCGCTCGGCCAAGGACTTAGGGCCGCGCCAGATCGACCACGTA 8812 | ||||| || | ||||| |||||||| || | ||| |||||||||| | ||| Sbjct 9121 GGCCGCGTGGCAGATGTGCGTTCGGCCAAAGATCTGACGCCACGCCAGATCGGCGCGGTA 9180 Query 8813 CTGGTCGAACTCCAGCGCCTGGGCTGGAAAC---CGAAGAGCAATCGGCAAGGCCGGGCG 8869 |||| ||| || |||||||||||| | | | ||| || |||||| | || Sbjct 9181 CTGGCCGAGTTCGCTCGCCTGGGCTGGGAGCCTACAAAGGCTAAAAAGCAAGG--GCGCA 9238 Query 8870 ACGCCAAAAGTGCCG---CAAAACCG-GCAAACCGTGCTGCGCAAAATCACCGCACTGCT 8925 | | || |||| || | | |||| | ||| | || || | ||||| || | || Sbjct 9239 AAG-CACCAGTGGCGGCTCCAGACCGTGTAAAAC-TGGTGGGGAAAATAGAGGCCTTTCT 9296 Query 8926 GGCCAGCGCCCATCGCCCCTGGAGCTACGCCGACCACATGGCCCGGCGCATGTTCCAGGT 8985 || || | || ||||| ||| |||||| ||||||| |||||||||| |||| Sbjct 9297 CTCCGAGGCAAAGCGTTCCTGGGCCTATGCCGACGGTATGGCCCTGCGCATGTTCAAGGT 9356 Query 8986 CGAGCGGGTCGAATGGCTGGAC 9007 ||| || ||||||||||| ||| Sbjct 9357 CGAACGCGTCGAATGGCTAGAC 9378 Score = 86.0 bits (94), Expect = 1e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 5685 TGCTGGCCGCCGAGGTGGCCCGCAGCAGCCAGACGAAAGCCGGCGAGGCAATCGGCATGA 5744 |||| |||||||| || ||| ||||| | || || ||| | || |||||||||| Sbjct 5330 TGCTTGCCGCCGAAGTTGCCGCCAGCAATAAAACCAAGGCCAGTCAGCGCATCGGCATGA 5389 Query 5745 GCCGTTCGACCGTCAGCACCATCCTCGCCAACCGCTACCCGTCGCCCTCGACGATCCGCG 5804 |||| | |||||||| ||||| |||||||||||| |||||| || ||| Sbjct 5390 GCCGCACAGCCGTCAGCTTGATCCTGGCCAACCGCTACAGCTCGCCCAGCACCTCTGGCG 5449 Query 5805 TCGAGCGTCGTGTCCTGGCCGCGCTGAGCCGCATTGAGTGCCCGGCCCTGGGCGAGGCGG 5864 |||||||||| || ||| | ||| | || ||||| ||| || |||| |||| | Sbjct 5450 TCGAGCGTCGGGTAATGGAAACCCTGGGGCGAATTGAATGCATCGCACTGGACGAGACCA 5509 Query 5865 TGACCTCGGTCGAGTGC 5881 | ||| | | | ||||| Sbjct 5510 TCACCACCGACCAGTGC 5526 >seq8567 Length=29384 Score = 161 bits (178), Expect = 2e-35 Identities = 187/247 (76%), Gaps = 4/247 (2%) Strand=Plus/Minus Query 25044 CGATGCAGGAAGCAACCGGCAAGGCTGTTTCGGATACGGTCGCCGAGTTCTCCAAGCTGG 25103 ||||||||||||| |||||||||||||| || || |||||||||||||||||||||| Sbjct 4898 CGATGCAGGAAGCCACCGGCAAGGCTGTGAGCGAGACTGTCGCCGAGTTCTCCAAGCTGG 4839 Query 25104 CCGACGAACCGGTCAAAGCCTC-GCAGCAGCTCAACGAGAAATATCACTACCTGACCGCC 25162 | ||||| ||||| || ||||| || || ||| |||||| | || ||||| ||||| || Sbjct 4838 CAGACGACCCGGTAAAGGCCTCTGCTGC-GCTGAACGAGCAGTACCACTATCTGACGGCT 4780 Query 25163 TCGGTTTACGAGCAGATAGCCGCCCTCGATCAGCAAGGCGAT-TCGCTGGGTGCCGCCCA 25221 ||||||||| |||||| ||||| || || ||||| |||||| ||| || || | | Sbjct 4779 TCGGTTTACTCGCAGATTGCCGCACTGGAGCAGCAGGGCGATCACGC-CGGCGCTGTGAA 4721 Query 25222 GCTGGCCATGGATGCCTATAGCCAGGCAATGGACGAGCGGGCGAGCCAGATCGTCGAGAA 25281 |||||| | ||| | || | | ||||| ||||||| | | |||| | || || Sbjct 4720 GCTGGCTACCGATTCGTACGCCGATGCAATCAACGAGCGCACCCCCAAGATTCTGGAAAA 4661 Query 25282 CCTGGGC 25288 |||| || Sbjct 4660 CCTGAGC 4654 Score = 93.3 bits (102), Expect = 1e-14 Identities = 408/637 (64%), Gaps = 18/637 (3%) Strand=Plus/Minus Query 25991 GACCAGGTCACCGCAGCCTATGAGGGGGAAATCCAGGCGCTGGAGGCGCTGCGCGACAAA 26050 ||| |||| |||||||||||||||| || || || |||||||| | | ||| Sbjct 4017 GACGAGGTGACCGCAGCCTATGAGGCCGAGATTGCCGCCCTGGAGGCCGTCAAAGGCAAG 3958 Query 26051 AGTTCCACCACGGCGGCCCAGCGCATCAGCCTGGACCAGAAGATCGCCGAGGCCAGGAAC 26110 | ||||| || || |||||| ||||| |||||||||||||||| || || | Sbjct 3957 AAGTCCACGACTGCTGCCCAGAGCATCCAGTTGGACCAGAAGATCGCTGACGCGCGCGCA 3898 Query 26111 AACATGGTCAAGGCGCAGAAGAAGGCCGACGCCGACCTGGAAGTCCT--CCAGCTCAACG 26168 ||||||||||||||||| |||||||| | | || || || | ||| ||||| Sbjct 3897 GGGATGGTCAAGGCGCAGAAAGAGGCCGACAACCAGCTTGAGGTGTTGGCCA--CCAACG 3840 Query 26169 AACAGGGGCGCCTGAAGAAACAGGCCCAGGCAGTCAAGGCCTACAGCGATGCGCTCCAGC 26228 | || |||||| | |||| | | || ||| ||||| | || || | Sbjct 3839 AGACCGGACGCCTGGCCGAGCAGGAACGGTCAATCACCACCTACGTGCAGGCCCTGGCTC 3780 Query 26229 AACAACAGGATGCGCTGGCCCTCCAGGGCCAACGTGCCGCCGCTGCCGTGGGCATGGGCG 26288 | |||||| || |||| || |||||||| || | || ||||||| ||| | Sbjct 3779 AGCAACAGCGAGCCCTGGAACTTGCCGGCCAACGCGCAGTACTTGGCGTGGGCCAGGGGG 3720 Query 26289 --CGCAACAGCGCCGCCTGTTCGATCAGCGTGGCAGCCTTGACGACCGATTCGCACAGCA 26346 ||| | | ||| || || | | ||||| | ||||| || || ||||| Sbjct 3719 ACCGCCAGAACGC--ACTCAACGGCGAACTGAACAGCCAGCAAGACCGGTTTGCTCAGCA 3662 Query 26347 GCGCCTGGACCTGGCGAGCCAGTACGGTGACGGCTCGCGAGGCATGAGCCTCGACGAGTA 26406 | ||||| |||| | |||| | ||| ||||| |||| || |||| Sbjct 3661 GTCGCTGGAGTTGGCCAACCAGAAATCCGACCCGTCGCGCAACATGTCGGAGGAGGAGTT 3602 Query 26407 CAA-CGACAAGCTCAAGGCGCT---GGAAGCTAACCATGCCGCGA-TGACCCAGCAGCTG 26461 ||| ||| || | | ||||||| || || ||| | ||||| | |||| ||| | Sbjct 3601 CAAGCGAAAATC-CCAGGCGCTCGCAGATGCGAACAAGGCCGCCACTGAC----CAGATC 3547 Query 26462 CAACGCAACTACGCCGACCTCCAGGCCGCCCAGGGTAACTGGGTCAACGGGGCGACGTCG 26521 | | ||||| || || | || ||||||||| | ||| || || ||||||||| Sbjct 3546 CGGCAGAACTATGCGGATGTGGAGAACGCCCAGGGCGATTGGACGAAGGGCGCGACGTCG 3487 Query 26522 GCGTTCGCTGATTACATCGACTCCGCCAGGGACGTCGCGGGTCAGACCTACGAACTGTTT 26581 |||| || |||| | || || || | | || |||| || |||||| | ||||| Sbjct 3486 GCGTGGGCCAATTATCTGGATTCGGCGAAGAACATCGCCGGCCAGACCAAGACCCTGTTC 3427 Query 26582 AGTAACGCCTTCTCCGGTCTGGAGGATGCCGTCGTTA 26618 | || |||||| | |||| ||||| || |||| Sbjct 3426 GGCAATGCCTTCAGCTCCATGGAAGATGCGGTTGTTA 3390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119438473110652