Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02]
39,413 sequences; 107,915,492 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq2393 152 1e-31
seq29849 136 8e-27
>seq2393
Length=4323
Score = 152 bits (168), Expect = 1e-31
Identities = 181/243 (74%), Gaps = 3/243 (1%)
Strand=Plus/Plus
Query 82568 CTCCATTTATCACCTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTG 82627
|||||| ||||| |||||| | || || ||||| | ||| || ||||| || |||||
Sbjct 1916 CTCCATC-ATCAC--ACCTCCGCGCAGGCGGAGAACCAGGTGAAGGGTAGACTCCTTCTG 1972
Query 82628 TATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCT 82687
|| || || |||| ||| | || || ||||||| || || || |||||||| ||||
Sbjct 1973 GATGTTGTAGTCAGCCAGAGTCCTGCCATCTTCTAACTGCTTGCCTGCAAAGATGAGTCG 2032
Query 82688 TTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGT 82747
||| || || || || || || ||||| || |||||||| | || |||||||| || ||
Sbjct 2033 TTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGAATCTTCGACTTCACATTTTCGATGGT 2092
Query 82748 ATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTG 82807
|||||| | || || || | ||| || ||||||||||| | ||||| || || |||||
Sbjct 2093 ATCATTCGACTCCACCTCAAGAGTAATAGTCTTGCCTGTGAGAGTCTTAACGAAGATCTG 2152
Query 82808 CAT 82810
|||
Sbjct 2153 CAT 2155
>seq29849
Length=3363
Score = 136 bits (150), Expect = 8e-27
Identities = 171/235 (73%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 82577 TCACCTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATA 82636
|||| |||| ||||| | ||||| || | ||| || || || || || || || || ||
Sbjct 1039 TCACTTACCACCTCTGAGTCGCAGCACAAGGTGGAGGGTCGACTCCTTTTGAATGTTGTA 1098
Query 82637 ATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATC 82696
|| | || | | |||||| || ||||| ||||| || ||||| | || || || ||
Sbjct 1099 GTCGGCAAGGGTGCGACCGTCCTCGAGTTGCTTTCCTGCGAAGATCAATCGCTGCTGGTC 1158
Query 82697 TGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGG 82756
|| || || |||||||| || || ||||| | || || || |||||||| || || |
Sbjct 1159 AGGCGGGATGCCTTCCTTGTCCTGGATCTTCGACTTCACGTTCTCAATCGTGTCGTTGGA 1218
Query 82757 TTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
|| ||||| | ||| ||||||||||| |||| ||||| ||||| || ||||||
Sbjct 1219 CTCGACTTCGAGAGTGATCGTCTTGCCGGTCAGTGTCTTCACAAAAATTTGCATT 1273
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981331397821007
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |