Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq21875 111 4e-19 >seq21875 Length=4161 Score = 111 bits (122), Expect = 4e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || |||||||| | || ||||| ||||| |||| Sbjct 428 AAGACCCTGACCGGGAAGACGATCACCCTTGAGGTGGAGTCAAACGACACGATCGAGAAT 369 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || ||||| || ||| ||| || ||||| |||||| Sbjct 368 GTGAAGTCTAAGATCCAGGACAAGGAAGGGATCCCGCCCGACCAGCAGAGACTGATCTTC 309 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 |||||||||||| | || || || || || ||||||| |||||| ||||||| ||||| Sbjct 308 GCCGGAAAGCAGCTCGAGGACGGCAGAACGCTGGCCGACTACAACATCCAGAAGGAGTCC 249 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 || || ||||| || |||||||| || Sbjct 248 ACCCTCCACCTGGTCTTGAGACTCCG 223 Score = 86.0 bits (94), Expect = 1e-11 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 || |||||||| || ||||| || || ||||| ||||||| || ||||| |||| || Sbjct 223 CGGAGTCTCAAGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTT 282 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAG 204846 || || || || |||||||||||||||||||| || Sbjct 283 CTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAG 317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181224005240373