Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_025430.1 Length=42351 Score E Sequences producing significant alignments: (Bits) Value seq36294 114 3e-21 >seq36294 Length=49020 Score = 114 bits (126), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 3/204 (1%) Strand=Plus/Minus Query 217 GCCATTCATGCCCACCACGATTTCAGTTGTGTAGCGATCAACGCCAGCCTGGTCCTGCCA 276 ||| | |||| | ||||||||||| || ||||| || | | ||| | | ||| || Sbjct 39194 GCCTTGCATGTCGACCACGATTTCGGTGGTGTAACGCTTGATGCCGTCTTTTTCC---CA 39138 Query 277 CTTGCGCGTTTGCAGCGCGCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTACTGGCT 336 || ||| ||||||||| |||||| ||| | |||| |||||||||||||| | | Sbjct 39137 CTCGCGGGTTTGCAGCTTGCCTTCGATGTAGACCTGCGAACCTTTGCGCAGGTATTCACC 39078 Query 337 GGCGATTTCTGCCAGCTTTCCGAAGATGACCACGCGGTGCCATTCCGTTTTTTCTTTCTT 396 |||||| ||||| | ||| ||||| || ||| ||||||||||| ||||| || ||| Sbjct 39077 GGCGATCTCTGCAACCTTGCCGAACATCGACACACGGTGCCATTCGGTTTTCTCGACCTT 39018 Query 397 CTCCCCTGTCTGCTTATCCTTCCA 420 || || || ||||| || |||| Sbjct 39017 CTGGCCGGTTTGCTTGTCGGTCCA 38994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135338228073778