Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq18707 333 3e-86 >seq18707 Length=2802 Score = 333 bits (368), Expect = 3e-86 Identities = 452/625 (72%), Gaps = 8/625 (1%) Strand=Plus/Minus Query 146884 GGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAG 146943 || ||||| ||||| | || | ||||| | || ||||| |||||||||||| ||| Sbjct 2595 GGAAAGGGGCGGGGCTCTCTCTCGAGCTGCTTCTTGAGGGGGTCCACGTGGTTGGTGTAT 2536 Query 146944 ACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCC 147003 |||||||||||||| || | || | || || || || || | ||| ||||| || Sbjct 2535 ACGTGCGCGTCCCCAAGCGAATGGATGAAATCGCCTGGTTTCAACCCGCACACGTCAGCG 2476 Query 147004 ACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCC 147063 | | || | ||| ||||| || |||||||||||||| ||||| |||||||| Sbjct 2475 AGAAGCACCGTCAACAGGGAGTAAGAAGCGATGTTGAAGGGGACGCCCAGCCCCATGTCG 2416 Query 147064 CCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGGCACAGG 147123 | ||||| ||||||| || || ||||||||||||| ||| ||||| |||||||| || Sbjct 2415 CACGACCGTTGGTACATTTGACAGGAGAGCTCCCCGTTGGCGACGTAGAACTGGCAGAGC 2356 Query 147124 ATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACC 147183 | ||||||||| ||||||||||| | ||| ||||||||||||| ||||||| | Sbjct 2355 ACGTGGCACGGGGGCAGCGCCATCTCCTTCAGCGCCGCGGGGTTCCACGCCGAGAGGATG 2296 Query 147184 AGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACG 147243 | |||||| |||||||| |||| || | ||| ||| | ||||||||| ||| Sbjct 2295 ATCCGCCTATCGTCGGGGTTGGTCTTGATGGTGTGGATCACCTGCGCCAGCTGGTCGACG 2236 Query 147244 CCCTGGCCCCCGTAGTTTG--TCCCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACT 147301 ||||| || ||||| | | ||| |||| |||| ||||| ||||||| ||||| Sbjct 2235 CCCTGCCCGGTGTAGTCGGCGTTCCG--GTCCTTGTACTCCGCCCCGAAGTGCCGCCACT 2178 Query 147302 GGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGC--TT 147359 |||||||||| | |||||||||||| || |||||| | ||||| || || | Sbjct 2177 GGAAGCCGTAGATGGGCCCCAGGTCGTTCTCCTCCCTGTGCTCG-AGCCC-CCTGCTGTC 2120 Query 147360 GAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTT 147419 ||| |||||| | | |||| |||||||||| || || ||||| | || | || Sbjct 2119 GAGGAACTCGCGCGTGCCGTTTCCGTCCCAGATCCCGACGCCCTTCTCCTTCAGGACGTT 2060 Query 147420 AGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGAC 147479 ||||||| ||||| || |||||||| |||||||||| ||||| | ||| || || Sbjct 2059 GCCGTCCGTGCAGCCCTTGACGAACCAGAACAGCTCCTCCGCGACCCCGCGCCAGAACAC 2000 Query 147480 CCTCTTGGTGGTCAGCAGGGGGAAC 147504 || ||| || |||||||| |||||| Sbjct 1999 CCGCTTCGTCGTCAGCAGCGGGAAC 1975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583200537343200