Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq34640 132 4e-26 seq29849 129 5e-25 seq2393 113 4e-20 >seq34640 Length=3269 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 35509 TCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGC 35568 ||||||||| | | | ||||| || | ||| |||||| || |||||||| || || Sbjct 1115 TCCACCACGCAGACGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGC 1174 Query 35569 CAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628 | || | |||| ||||||||||| || || || ||||||||||||||||| | || Sbjct 1175 AAGCGTCCTGCCGTCCTCCAGCTGCTTCCCGGCGAAGATCAACCGCTGCTGGTCAGGCGG 1234 Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688 | || |||||||||| |||||| ||||| | | | | ||||| |||| || || Sbjct 1235 GATGCCCTCCTTGTCCTGGATCTTCGACTTCACATTCTCGATGGTGTCATTCGACTCGAC 1294 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | |||||| || || ||||||| || || || || |||||||| Sbjct 1295 CTCGAGCGTGATTGTCTTGCCCGTCAGGGTCTTAACGAAGATCTGCAT 1342 >seq29849 Length=3363 Score = 129 bits (142), Expect = 5e-25 Identities = 146/196 (74%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||||||||||||||| ||||| | ||| || |||| || || ||||| || || || Sbjct 1081 CTCCTTTTGAATGTTGTAGTCGGCAAGGGTGCGACCGTCCTCGAGTTGCTTTCCTGCGAA 1140 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||||||||| | || | || ||||||||| |||||| ||||| | Sbjct 1141 GATCAATCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGGATCTTCGACTTCACGTT 1200 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||||| | || || || || | |||||||| || || |||| || ||||| Sbjct 1201 CTCAATCGTGTCGTTGGACTCGACTTCGAGAGTGATCGTCTTGCCGGTCAGTGTCTTCAC 1260 Query 35725 AAATATCTGCATTCTG 35740 ||| || |||||| || Sbjct 1261 AAAAATTTGCATTTTG 1276 >seq2393 Length=4323 Score = 113 bits (124), Expect = 4e-20 Identities = 142/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || |||| || | | || || | |||||| || ||||| Sbjct 932 CTCCTTCTGGATGTTGTAGTCAGCCAGAGTCCTGCCATCTTCTAACTGCTTGCCTGCAAA 991 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || |||||||||| || | | |||||||||| ||||| ||||| | | Sbjct 992 GATGAGTCGTTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGAATCTTCGACTTCACATT 1051 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | || || |||| |||||||| | ||||| || || || || | ||||||||| Sbjct 1052 TTCGATGGTATCATTCGACTCCACCTCAAGGGTGATAGTCTTGCCAGTAAGAGTTTTCAC 1111 Query 35725 AAATATCTGCATTCT 35739 ||| ||||||||||| Sbjct 1112 AAAGATCTGCATTCT 1126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450571510898040