Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_026594.1 Length=56537 Score E Sequences producing significant alignments: (Bits) Value seq7847 111 6e-20 >seq7847 Length=4071 Score = 111 bits (122), Expect = 6e-20 Identities = 227/331 (69%), Gaps = 16/331 (5%) Strand=Plus/Minus Query 36713 TCGGCCCTGCGGGCACCGGGAAGACCTTCCTGGCCATTCAC--CACGGACTGCGCCTGCT 36770 |||||||||| || ||||| ||||||| ||||||| | | | ||| | |||| || Sbjct 3500 TCGGCCCTGCCGGTACCGGCAAGACCTACCTGGCCGTGGCCTGCGCGGTCGACGCC--CT 3443 Query 36771 GGAGGCCAAGGAAATCCAGCGACTCGTCATCACTCGCCCCGCCGTCGAGGCCGAGGAGAA 36830 |||| | || | | | || || | | || || || || || |||| ||||| Sbjct 3442 GGAGCGCGAGCAGGTACGACGCATCCTGCTGGTGCGTCCGGCGGTGGAAGCCGGCGAGAA 3383 Query 36831 GCTCGGCTACCTGCCCGGCGGCATCGAAGAGAAGATGGCTCCGTACCTGATCCCGATGCT 36890 ||| |||| ||||||||| | | | ||||||| | ||||||||| |||| | Sbjct 3382 GCTGGGCTTTTTGCCCGGCGACCTGGCCCAGAAGATCGACCCGTACCTGCGCCCGCTCTA 3323 Query 36891 GGACGCGGTGATCGACCTGGTTGGCC-CGACGA--TGGCCAAGCGCCTGCAGGAGACCCG 36947 |||||| | ||| || | ||| ||| | ||||||||| || ||| || Sbjct 3322 CGACGCGCTCTACGAGATGCTCGGCTTCGAATACGTGGCCAAGC---TGATCGAG---CG 3269 Query 36948 CCAGCT---CGAGATCGCCCCGCTGGCCTACATGCGAGGCCGAACCTTCAACGACACGTT 37004 |||| | ||||||||||||||||||||||||||| ||||| || | ||| ||| || Sbjct 3268 CCAGGTGATCGAGATCGCCCCGCTGGCCTACATGCGTGGCCGTACGCTGAACAACAGCTT 3209 Query 37005 CCTCATCGCCGACGAGATGCAGAACGCCACC 37035 | |||| |||||| | |||||| ||||| Sbjct 3208 CATCATTCTCGACGAAAGCCAGAACACCACC 3178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180712181786694