Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq34427 89.7 2e-12 seq26061 84.2 7e-11 >seq34427 Length=4033 Score = 89.7 bits (98), Expect = 2e-12 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 254971 CGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGG 255030 |||| | |||| ||| | || ||||||||| || ||| || |||||||| ||||| || Sbjct 3585 CGGCCTCGTACCGATGCTTCGCGTGTTCAACGACACGGCGCGTTACGTCGACCAAGGCGG 3644 Query 255031 CGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACAT 255084 ||||| || || | ||| |||||||||| |||||||||||||| ||||| Sbjct 3645 AGGCAAGCGAAAGGGTTCCTTCGCCATCTACCTCGAGCCGTGGCACGCGGACAT 3698 >seq26061 Length=1673 Score = 84.2 bits (92), Expect = 7e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 443763 CTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACT 443822 ||| ||||||||| |||| ||||| || || |||| || ||||| || | ||||| Sbjct 881 CTCGATCTTCTGGCTGAAGAAGCGGGGGCTGATGCCGGGGCTGACGTTCACGAACGAGTA 940 Query 443823 GATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACACCAA 443876 ||| || |||||||| |||| |||||||||||||| || ||||||| ||| Sbjct 941 CATCTCCCGAGACGAGGGCATGCACTGCGACTTCGCCTGCCTGCTCTACAACAA 994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1587533923575785