Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_027991.1 Length=147303 Score E Sequences producing significant alignments: (Bits) Value seq36274 140 3e-28 >seq36274 Length=4794 Score = 140 bits (154), Expect = 3e-28 Identities = 177/241 (73%), Gaps = 2/241 (1%) Strand=Plus/Plus Query 58102 CGGCTGTAAAGCGGGGCTGGTATTCAACCCGGCAACGCCGCTCAGTTATCTCGATTACGT 58161 ||| || || ||||| ||||| ||||||||||| |||||||| || || || ||||| Sbjct 1981 CGGTTGCAAGGCGGGCCTGGTGTTCAACCCGGCCACGCCGCTGAGCGTGCTTGAGTACGT 2040 Query 58162 CATGGACAAACTGGATGTGATCCTGCTGATGTCCGTGAACCCAGGCTTCGGCGGCCAGTC 58221 ||||||||| | || || | |||||||| ||| ||||| ||||||||||| ||| Sbjct 2041 GATGGACAAAGTCGACATGGTGTTGCTGATGAGCGTCAACCCGGGCTTCGGCGGGCAGAA 2100 Query 58222 TTTTATTCCGCAGACGCTGGATAAACTGCGCGAAGTGC-GTCGCCGCATTGATGCGTCCG 58280 || || || || || | || ||||| |||| || | ||| | || |||||||| | Sbjct 2101 GTTCATCCCCGGCACCCTCAACAAGCTGCGTGAAGCGCGGGCGCTG-ATCGATGCGTCGG 2159 Query 58281 GTTACGACATTCGCCTGGAAGTGGACGGCGGCGTGAAGGTGAACAATATCGGCGAGATCG 58340 | || || |||||||| | ||||| ||||| || || ||||| ||| |||| |||| Sbjct 2160 GCCGTGATATCCGCCTGGAGATCGACGGTGGCGTCAACGTCAACAACATCCGCGAAATCG 2219 Query 58341 C 58341 | Sbjct 2220 C 2220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471009436935240