Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_027995.1 Length=41666 Score E Sequences producing significant alignments: (Bits) Value seq36294 89.7 1e-13 >seq36294 Length=49020 Score = 89.7 bits (98), Expect = 1e-13 Identities = 125/172 (73%), Gaps = 5/172 (3%) Strand=Plus/Plus Query 41289 ACCGGCGAGAAGAAAGAACAAACGGAATGGCACCGCGTTGTC-ATCTTCGGTAAGCTGGC 41347 |||||| ||||| || |||| ||||||||||| | |||| || ||||| ||| | || Sbjct 39009 ACCGGCCAGAAGGTCGAGAAAACCGAATGGCACCGTG-TGTCGATGTTCGGCAAGGTTGC 39067 Query 41348 AGAAATTGCTAGCGAATACCTGCGCAAAGGTAGCAAGGTGTTCATTGAAGGCAGCCTGCG 41407 ||| || || | |||||||||||||||||| |||| | ||| ||||||| |||| Sbjct 39068 AGAGATCGCCGGTGAATACCTGCGCAAAGGTTCGCAGGTCTACATCGAAGGCAAGCTGCA 39127 Query 41408 AACGCGTAAATGGCAGGACCAGGCTGGCGTTGATCGCTACACCACTGAAATC 41459 ||| || | || ||| | | ||| | | || |||||||| |||||| Sbjct 39128 AACCCGCGAGTG---GGAAAAAGACGGCATCAAGCGTTACACCACCGAAATC 39176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133147253994168