Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq26061 87.8 2e-12 >seq26061 Length=1673 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/189 (71%), Gaps = 3/189 (2%) Strand=Plus/Minus Query 122677 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736 ||||| |||||||| || || || | ||| || || ||||| || ||||||||| Sbjct 958 CCCTCGTCTCGGGAGATGTACTCGTTCGTGAACGTCAGCCCCGGCATCAGCCCCCGCTTC 899 Query 122737 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 122796 |||| ||| | || | |||||| ||||||||||||||||| |||||||| || ||| Sbjct 898 TTCAGCCAGAAGATCGAGCAGAACGACCCGGAGAAGAAGATGCCCTCCACCGCTGCGAAC 839 Query 122797 GCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAACCATTTCATTGCCCATTTC 122856 || | || | || ||||| | | | | ||| | | ||| || || ||||| | Sbjct 838 GCGACGAGCCTCTCCGCGAACGTG-GCGGAGCTGC--CGATCCACTTGATGGCCCACTCG 782 Query 122857 GCCTTCTTC 122865 ||||||||| Sbjct 781 GCCTTCTTC 773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627722592184800