Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq26061 89.7 6e-13 >seq26061 Length=1673 Score = 89.7 bits (98), Expect = 6e-13 Identities = 190/282 (67%), Gaps = 5/282 (2%) Strand=Plus/Plus Query 94657 GAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTC 94716 ||||| |||||| ||||| |||| ||| || ||| | || || || | ||| Sbjct 681 GAGACGTACAGTCTGCTCATCGACACGTACATCAAGAACAACGCCGAAAAAGACACGCTG 740 Query 94717 TTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGG 94776 || | || ||| || || ||||| | ||||| || || ||||| || |||||| Sbjct 741 TTCAAGGCGATCTCGACGGTGCCGTGCGTCACGAAGAAGGCCGAGTGGGCCATCAAGTGG 800 Query 94777 TTTGATA-CAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGG 94835 | | | | | | ||||| || ||| | ||| |||| || || || ||||| Sbjct 801 ATCGGCAGCTCCGCCACGTTC----GCGGAGAGGCTCGTCGCGTTCGCAGCGGTGGAGGG 856 Query 94836 TATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCC 94895 ||||||||||| || || |||||| | || | ||||| |||||||| || || ||||| Sbjct 857 CATCTTCTTCTCCGGGTCGTTCTGCTCGATCTTCTGGCTGAAGAAGCGGGGGCTGATGCC 916 Query 94896 AGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 94937 || || ||| | |||||| ||||| || |||||||| Sbjct 917 GGGGCTGACGTTCACGAACGAGTACATCTCCCGAGACGAGGG 958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582973449276120