Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq18707 288 8e-73 >seq18707 Length=2802 Score = 288 bits (318), Expect = 8e-73 Identities = 441/629 (70%), Gaps = 0/629 (0%) Strand=Plus/Minus Query 29832 TCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTAT 29891 ||| ||| |||||||| | |||||| ||||||||||| |||| || || ||||||| | Sbjct 2603 TCAATGTCGGAAAGGGGCGGGGCTCTCTCTCGAGCTGCTTCTTGAGGGGGTCCACGTGGT 2544 Query 29892 CCAGGTAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGA 29951 ||| ||||| ||||| || || |||| || || || |||| | |||| | Sbjct 2543 TGGTGTATACGTGCGCGTCCCCAAGCGAATGGATGAAATCGCCTGGTTTCAACCCGCACA 2484 Query 29952 CGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCC 30011 ||| ||| | | ||| | || ||||| |||||||| ||||| || || |||| Sbjct 2483 CGTCAGCGAGAAGCACCGTCAACAGGGAGTAAGAAGCGATGTTGAAGGGGACGCCCAGCC 2424 Query 30012 CCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACT 30071 ||||||| | ||||| ||||| | ||||| |||||||| |||| | ||||| |||| Sbjct 2423 CCATGTCGCACGACCGTTGGTACATTTGACAGGAGAGCTCCCCGTTGGCGACGTAGAACT 2364 Query 30072 GACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGC 30131 | || | |||||||||| || || ||||| || | ||||||||| || Sbjct 2363 GGCAGAGCACGTGGCACGGGGGCAGCGCCATCTCCTTCAGCGCCGCGGGGTTCCACGCCG 2304 Query 30132 ACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCT 30191 | | |||||| ||||| || || |||||| || ||||| || | | | ||||| Sbjct 2303 AGAGGATGATCCGCCTATCGTCGGGGTTGGTCTTGATGGTGTGGATCACCTGCGCCAGCT 2244 Query 30192 GATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCC 30251 | || || ||| ||| | |||||| || || |||| ||||||| || ||||| |||| Sbjct 2243 GGTCGACGCCCTGCCCGGTGTAGTCGGCGTTCCGGTCCTTGTACTCCGCCCCGAAGTGCC 2184 Query 30252 TCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCT 30311 ||||||||| ||||| | || |||||||| ||| ||||||||||||| ||||| Sbjct 2183 GCCACTGGAAGCCGTAGATGGGCCCCAGGTCGTTCTCCTCCCTGTGCTCGAGCCCCCTGC 2124 Query 30312 TGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGAGAGCT 30371 |||| | || || | | ||||| ||||||||||| || |||||||| || Sbjct 2123 TGTCGAGGAACTCGCGCGTGCCGTTTCCGTCCCAGATCCCGACGCCCTTCTCCTTCAGGA 2064 Query 30372 CTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAA 30431 | ||| || ||| | || |||||||||| | |||||||||| |||| | ||| | Sbjct 2063 CGTTGCCGTCCGTGCAGCCCTTGACGAACCAGAACAGCTCCTCCGCGACCCCGCGCCAGA 2004 Query 30432 AGACCCTCTTGGTCGTGAGGAGGGGAAAC 30460 | |||| ||| ||||| || || || ||| Sbjct 2003 ACACCCGCTTCGTCGTCAGCAGCGGGAAC 1975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406115230449996