Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_028770.1 Length=59878 Score E Sequences producing significant alignments: (Bits) Value seq7847 100 1e-16 >seq7847 Length=4071 Score = 100 bits (110), Expect = 1e-16 Identities = 287/435 (66%), Gaps = 16/435 (4%) Strand=Plus/Minus Query 5822 ACGACCTGACCGTCTCCACCGGCCCAGCAGGGACGGGGAAGACCTTCCTGGCCAT--CCA 5879 ||||| | | | || || |||||| || || || || ||||||| ||||||| | || Sbjct 3518 ACGACATCAACTTCGGCATCGGCCCTGCCGGTACCGGCAAGACCTACCTGGCCGTGGCCT 3459 Query 5880 CCACGGCCTGCGCCTGCTGGAGGCCGGGGAGATCCAGCGCCTCGTCATCACCCGGCCCGC 5939 | ||| | |||| |||||| || | || | | ||| || | | || || || Sbjct 3458 GCGCGGTCGACGCC--CTGGAGCGCGAGCAGGTACGACGCATCCTGCTGGTGCGTCCGGC 3401 Query 5940 CGTTGAGGCAGATGAGAAGCTCGGCTTCCTGCCCGGCACTGTGGACGAGAAGATGGCACC 5999 || || || | |||||||| ||||| |||||||| ||| | ||||||| | || Sbjct 3400 GGTGGAAGCCGGCGAGAAGCTGGGCTTTTTGCCCGGCGACCTGGCCCAGAAGATCGACCC 3341 Query 6000 CTACCTCACCCCGATGCTGGACGCGGTGATCGACCTGGTCGGCC-CGACGA--TGACGAA 6056 ||||| |||| | |||||| | ||| || ||||| ||| | || | || Sbjct 3340 GTACCTGCGCCCGCTCTACGACGCGCTCTACGAGATGCTCGGCTTCGAATACGTGGCCAA 3281 Query 6057 GCGCCTCCTCGAGTCGCGCCAGCTG---GAGGTCGCCCCGCTGGCCTACATGCGAGGCCG 6113 || | ||||| |||||| || ||| |||||||||||||||||||||| ||||| Sbjct 3280 GC---TGATCGAG---CGCCAGGTGATCGAGATCGCCCCGCTGGCCTACATGCGTGGCCG 3227 Query 6114 GACGTTCAACGACACGTACATCGTCGCTGACGAGATGCAGAACGCCACCCCGCGCCAGAC 6173 ||| | ||| ||| | |||| | ||||| | |||||| ||||| |||| Sbjct 3226 TACGCTGAACAACAGCTTCATCATTCTCGACGAAAGCCAGAACACCACCGTTGAACAGAT 3167 Query 6174 CGCGCTGCTGGTGACCCGCCTGGGCTTCGGGACGAAGGCCGTCCTGAACGGTGACCCGGC 6233 | || | ||||||| | || ||||| | | ||||| | | ||| ||| | Sbjct 3166 GAAGATGTTCCTGACCCGGATCGGTTTCGGCTCCACCGCCGTGATCACCGGCGACGTCAC 3107 Query 6234 CCAGTGCGACCTGCC 6248 |||| ||||||||| Sbjct 3106 CCAGGTCGACCTGCC 3092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 191398377991040