Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02]
39,413 sequences; 107,915,492 total letters
Query= NC_028827.1
Length=50165
Score E
Sequences producing significant alignments: (Bits) Value
seq24902 154 5e-33
>seq24902
Length=16590
Score = 154 bits (170), Expect = 5e-33
Identities = 229/323 (71%), Gaps = 4/323 (1%)
Strand=Plus/Plus
Query 40091 CCGAAGGTCCCGATCTGTGCGACCTTGTCGGCCCCGTACTTCTCGGTGACGTACCGGATG 40150
|||||||| |||||| ||| || | |||||| ||||||| |||||| ||
Sbjct 1955 CCGAAGGTGATGATCTGGCTTACCGCGTTGCGCCCGTATTTCTCGGCCACGTACTCAATA 2014
Query 40151 ACCTCGCCGCGACG--CCGGTCATCGAAGTCGATGTCAACGTCGGGCATGGACACGCGCT 40208
||| | |||||| || || |||||||| ||| | ||||||||| || || || |
Sbjct 2015 ACCCGGTCGCGACCATCCATGCA--GAAGTCGACGTCGAAGTCGGGCATCGATACCCGTT 2072
Query 40209 CGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGTGGATCGAGGTCGGTGATCC 40268
| ||||| ||||| || ||||| | || | | ||||| || |||||||||||||||
Sbjct 2073 CCGGGTTAAGGAAACGTTCGAACAGCAGGTCATATTCCAGCGGGTCGAGGTCGGTGATCT 2132
Query 40269 CGAGGCAGTAGGCGACCAGCGAACCGGCTGCCGAGCCTCGCCCAGGACCGACCCACACGC 40328
| ||||| |||||||| ||||| |||| || || || || || ||| |||||
Sbjct 2133 TCTGCACATAGGCCACCAGCGACCCGGCACCCGATCCACGGCCTGGGCCCACCGGCACGC 2192
Query 40329 CGTTCTCCTTGGCCCAGCCGATGAAGTCGGCGACGACCAGGAAGTAGGACGGGAAGCCCA 40388
|||| |||||||| ||| ||||| |||| ||||||||| ||||| ||||
Sbjct 2193 CGTTGCTTTTGGCCCACTGGATAAAGTCCATTACGATCAGGAAGTAACCGGGGAACCCCA 2252
Query 40389 TCTGGATGATCATGTCGATCTCG 40411
||||||| || || || | ||||
Sbjct 2253 TCTGGATAATGATATCCAGCTCG 2275
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 160331325092862
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |