Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_028827.1 Length=50165 Score E Sequences producing significant alignments: (Bits) Value seq24902 154 5e-33 >seq24902 Length=16590 Score = 154 bits (170), Expect = 5e-33 Identities = 229/323 (71%), Gaps = 4/323 (1%) Strand=Plus/Plus Query 40091 CCGAAGGTCCCGATCTGTGCGACCTTGTCGGCCCCGTACTTCTCGGTGACGTACCGGATG 40150 |||||||| |||||| ||| || | |||||| ||||||| |||||| || Sbjct 1955 CCGAAGGTGATGATCTGGCTTACCGCGTTGCGCCCGTATTTCTCGGCCACGTACTCAATA 2014 Query 40151 ACCTCGCCGCGACG--CCGGTCATCGAAGTCGATGTCAACGTCGGGCATGGACACGCGCT 40208 ||| | |||||| || || |||||||| ||| | ||||||||| || || || | Sbjct 2015 ACCCGGTCGCGACCATCCATGCA--GAAGTCGACGTCGAAGTCGGGCATCGATACCCGTT 2072 Query 40209 CGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGTGGATCGAGGTCGGTGATCC 40268 | ||||| ||||| || ||||| | || | | ||||| || ||||||||||||||| Sbjct 2073 CCGGGTTAAGGAAACGTTCGAACAGCAGGTCATATTCCAGCGGGTCGAGGTCGGTGATCT 2132 Query 40269 CGAGGCAGTAGGCGACCAGCGAACCGGCTGCCGAGCCTCGCCCAGGACCGACCCACACGC 40328 | ||||| |||||||| ||||| |||| || || || || || ||| ||||| Sbjct 2133 TCTGCACATAGGCCACCAGCGACCCGGCACCCGATCCACGGCCTGGGCCCACCGGCACGC 2192 Query 40329 CGTTCTCCTTGGCCCAGCCGATGAAGTCGGCGACGACCAGGAAGTAGGACGGGAAGCCCA 40388 |||| |||||||| ||| ||||| |||| ||||||||| ||||| |||| Sbjct 2193 CGTTGCTTTTGGCCCACTGGATAAAGTCCATTACGATCAGGAAGTAACCGGGGAACCCCA 2252 Query 40389 TCTGGATGATCATGTCGATCTCG 40411 ||||||| || || || | |||| Sbjct 2253 TCTGGATAATGATATCCAGCTCG 2275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160331325092862