Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_028876.1 Length=109800 Score E Sequences producing significant alignments: (Bits) Value seq17687 120 2e-22 >seq17687 Length=17369 Score = 120 bits (132), Expect = 2e-22 Identities = 232/336 (69%), Gaps = 11/336 (3%) Strand=Plus/Plus Query 96522 CGTCGGATACGAAAGCGCCCTGTATCCGGAT-GGCACCCCGCGCCCCCACGGGCAGGAAT 96580 ||||||| ||||| ||||| || | ||||| |||| | | ||| ||| || | | Sbjct 5483 CGTCGGAGACGAACGCGCCGTGGACACGGATCGGCAAACTGGTGCCCGGCGG-CATGTAG 5541 Query 96581 AACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTCGTCCAGGATCACCCGGCTA 96640 | | |||||| |||| || |||||||| ||||||| ||| | ||| |||| | Sbjct 5542 AGCATGTCACCGTGGCCCAGCAGTTGCTCGGCGCCGCCCTGGTCGATGATGGTCCGGGAA 5601 Query 96641 TCGGT---GAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCACGTTGGATTTGATAAGG 96697 ||| | | || | ||| |||| | | | ||| | ||||| ||||| ||| Sbjct 5602 TCGATCTTGCTCGACACC-TGG--AACGCCATGCGGGTCGGGATGTTGGCCTTGATCAGG 5658 Query 96698 CCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATACCGGCTGCG 96757 || |||| || ||||| || || ||||| ||||| |||| | || || ||||| || Sbjct 5659 CCGGTGATCACGTCCACCGACGGACGCTGGGTCGCGAGGATCAAGTGGATCCCGGCGGCC 5718 Query 96758 CGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTCTTGTAGCCGCCCATC 96817 ||||||||||||||||| ||| | || | |||| | |||||| | || |||| Sbjct 5719 CGCGCCTTCTGGGCGATACGGGCGATCAGCTCTTCGA---CCTTCTTGCCGACGATCATC 5775 Query 96818 ATGAGGTCTGCGAGTTCGTCGACCACTACCACGATG 96853 || | ||| || | |||||||||||| ||||||||| Sbjct 5776 ATCATGTCGGCAAATTCGTCGACCACCACCACGATG 5811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351066485598573