Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_028979.1 Length=57253 Score E Sequences producing significant alignments: (Bits) Value seq12390 80.6 1e-10 >seq12390 Length=60018 Score = 80.6 bits (88), Expect = 1e-10 Identities = 106/142 (75%), Gaps = 4/142 (3%) Strand=Plus/Minus Query 44218 CGTGTGGACGATCCCGACGACACCGTTCCCCGG-CTCGCACTTCGCCACGTTCCCGCAGG 44276 ||| ||||| | |||||| ||| ||| | || | | ||||||||||| ||||||| | Sbjct 51902 CGTATGGACTGTGCCGACG-CACAGTTTCAAGGGCGCACACTTCGCCACCTTCCCGCCTG 51844 Query 44277 AGCTGCCGCGCCGCTGCATCTTGGCCGG-GTGCAAGCCCGGCGGCGTCGTGCTCGACCCG 44335 | ||| |||| ||| || ||||||| | || | | ||||||| ||||||| ||||| Sbjct 51843 ACCTGATTCGCCCATGCGTCCTGGCCGGCGCGCCA-CTCGGCGGCATCGTGCTTGACCCT 51785 Query 44336 TTCCACGGTTCCGGCACAACGG 44357 ||| |||| |||| || |||| Sbjct 51784 TTCGGCGGTGCCGGTACGACGG 51763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 183002309437790