Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_029066.1 Length=48666 Score E Sequences producing significant alignments: (Bits) Value seq21847 95.1 4e-15 >seq21847 Length=54027 Score = 95.1 bits (104), Expect = 4e-15 Identities = 196/287 (68%), Gaps = 6/287 (2%) Strand=Plus/Minus Query 967 GTAGCGGGAGTTCGGGAACAGCTCGGCATACTTGTCGTCCGTGAGCATGCCGAGCTTGAT 1026 || || ||| | ||||| |||||||| ||||||||||| ||||| || |||||||| Sbjct 3596 GTTGCTGGAACTGGGGAATAGCTCGGCGTACTTGTCGTCGTCGAGCAGCCCCAGCTTGAT 3537 Query 1027 CAGCTGGGTTACCTGAGCACGTAAACC--TGCTGCTGCTGCAAATCCCTTGGGCGTCTGA 1084 |||| ||||||| || |||| || |||| | | ||| || | ||| Sbjct 3536 CAGCCCCTTTACCTGGTCA--ACAACCTGTGAGGCTGATTTGATTCCTTTCTGTGTCGCG 3479 Query 1085 GGATAGGGGAGCGTTTCGCAGCGTCGCTCTTTC-TTCCATGTGAATCGGATGCGGACGGA 1143 ||||||||||||||||| | ||| || || | ||||| | ||||||||||||| || Sbjct 3478 GGATAGGGGAGCGTTTCACTGCGCCG-GCTGCCGTTCCACATAAATCGGATGCGGATCGA 3420 Query 1144 GCTTCCGGCGATTTCGACGCCCTGGGGGAGCCCCACTGCTTTTCTGCCCATTCGTTGTAC 1203 | | || || | || ||| || ||||||| |||| |||||||| || Sbjct 3419 TCCGTGGTGGAGGTCCATTCCTGCGGGCAGACCCACTGACTTTCGAGCCATTCGTAATAT 3360 Query 1204 CTCTCCAGGCTGTACATGATACAGCCGTCAACCTTCTCCCATACGCC 1250 ||| | |||||| ||||| | || | || ||| | ||| ||||| Sbjct 3359 CTCCTGATGCTGTAGATGATCCTGCTGCCATGCTTATTCCAGACGCC 3313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155536770136168