Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_029079.1 Length=75339 Score E Sequences producing significant alignments: (Bits) Value seq23244 230 1e-55 >seq23244 Length=7436 Score = 230 bits (254), Expect = 1e-55 Identities = 412/600 (69%), Gaps = 9/600 (2%) Strand=Plus/Minus Query 66290 GCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCT 66349 ||| || || || | ||| |||| |||| || |||||||| || ||||| || || Sbjct 7431 GCTGGGCGTCAACGTTGACGACCTGCTGGTTTCGCAACCGGACACCGGTGAGCAAGCGCT 7372 Query 66350 GGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGT 66409 ||| ||| ||| | || || || || | | | |||| || ||||| || Sbjct 7371 GGAAATCACCGACATGCTGGTGCGCTCCAACGCCATCGACGTGATCGTGGTCGACTCCGT 7312 Query 66410 GGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCT 66469 ||| |||||||| || || || |||||||||| || || |||| ||||| ||||| Sbjct 7311 GGCAGCCCTGGTACCCAAGGCTGAAATCGAAGGCGAAATGGGCGACATGCACGTGGGCCT 7252 Query 66470 GCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAA 66529 || || ||| | ||||| |||||| |||| || ||||||| | |||| | | |||| Sbjct 7251 TCAAGCCCGCTTGATGTCCCAGGCCCTGCGTAAAATCACCGGTAACATCAAGAACGCCAA 7192 Query 66530 CACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCC 66589 | ||| | ||| |||||||| | || |||||||||| || | | |||| Sbjct 7191 CTGCCTGGTGATCTTCATCAACCAGATCCGGATGAAGATCGGCGTGATGTTCGGCAGCCC 7132 Query 66590 GAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGT 66649 | || |||||||| || || || || ||| ||||||||| || ||||| |||| | Sbjct 7131 G---GAAACCACCACCGGTGGTAACGCGCTGAAGTTCTACGCTTCGGTCCGTCTGGACAT 7075 Query 66650 CCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAA 66709 |||||| | || | | | ||||||||| || |||| |||||| | | ||||| || || Sbjct 7074 CCGTCGTACCGGCGCGGTGAAGGAAGGTGACGAGGTTGTCGGTAGCGAAACCCGCGTTAA 7015 Query 66710 GGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAATGCCGAGTTCTCCGTCGTGTACGG 66769 ||||| ||||||||| ||||||||||| ||| | ||||||||| | | ||||| Sbjct 7014 AGTCGTGAAGAACAAGGTGGCCCCGCCGTTCCGTCAGGCCGAGTTCCAGATTCTCTACGG 6955 Query 66770 GGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAA 66829 |||| |||| | | | ||| | ||||||||| |||| ||| || | || | Sbjct 6954 CAAGGGTATCTACCTGAACGGCGAGATGATCGACCTGGGCGTGCTGCACGGTTTCGTCGA 6895 Query 66830 GAAGTCGGGCGCCTGGT---TCAAGTACGGGGACAAGAACGTCGCCCAGGGCAAGCCCAA 66886 ||| || || ||||||| | | |||| ||||| ||| |||||||||| |||| Sbjct 6894 GAAATCCGGTGCCTGGTATGCCTACAACGGCAGCAAGA---TCGGCCAGGGCAAGGCCAA 6838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 240844255842900