Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq18707 282 3e-71 >seq18707 Length=2802 Score = 282 bits (312), Expect = 3e-71 Identities = 440/629 (70%), Gaps = 0/629 (0%) Strand=Plus/Minus Query 27098 TCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGAT 27157 ||| ||| |||||||| | |||||| ||||||||||| |||| || || |||||||| | Sbjct 2603 TCAATGTCGGAAAGGGGCGGGGCTCTCTCTCGAGCTGCTTCTTGAGGGGGTCCACGTGGT 2544 Query 27158 CCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGA 27217 ||| ||||| ||||| || || | |||| || || || |||| | |||| | Sbjct 2543 TGGTGTATACGTGCGCGTCCCCAAGCGAATGGATGAAATCGCCTGGTTTCAACCCGCACA 2484 Query 27218 CGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCC 27277 ||| ||| | | ||| | || ||||| |||||||| ||||| || || |||| Sbjct 2483 CGTCAGCGAGAAGCACCGTCAACAGGGAGTAAGAAGCGATGTTGAAGGGGACGCCCAGCC 2424 Query 27278 CCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACGTAAAACT 27337 ||||||| | ||||| ||||| | ||||| |||||||| || | | ||||| |||| Sbjct 2423 CCATGTCGCACGACCGTTGGTACATTTGACAGGAGAGCTCCCCGTTGGCGACGTAGAACT 2364 Query 27338 GACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGC 27397 | || | |||||||||| || || ||||| || | ||||||||| || Sbjct 2363 GGCAGAGCACGTGGCACGGGGGCAGCGCCATCTCCTTCAGCGCCGCGGGGTTCCACGCCG 2304 Query 27398 ACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCT 27457 | | |||||| ||||| || || |||||| || ||||| || | | | ||||| Sbjct 2303 AGAGGATGATCCGCCTATCGTCGGGGTTGGTCTTGATGGTGTGGATCACCTGCGCCAGCT 2244 Query 27458 GATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCC 27517 | || || ||| ||| | |||||| | || |||| ||||||| || ||||| |||| Sbjct 2243 GGTCGACGCCCTGCCCGGTGTAGTCGGCGTTCCGGTCCTTGTACTCCGCCCCGAAGTGCC 2184 Query 27518 TCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCT 27577 ||| ||||| ||||| | || |||||||| ||| ||||||||||||| ||||| Sbjct 2183 GCCACTGGAAGCCGTAGATGGGCCCCAGGTCGTTCTCCTCCCTGTGCTCGAGCCCCCTGC 2124 Query 27578 TGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCT 27637 |||| | || || | | ||||| ||||||||||| || |||||||| || Sbjct 2123 TGTCGAGGAACTCGCGCGTGCCGTTTCCGTCCCAGATCCCGACGCCCTTCTCCTTCAGGA 2064 Query 27638 CTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAA 27697 | ||| || ||| | || |||||||||| | |||||||||| |||| | ||| | Sbjct 2063 CGTTGCCGTCCGTGCAGCCCTTGACGAACCAGAACAGCTCCTCCGCGACCCCGCGCCAGA 2004 Query 27698 AGACCCTCTTGGTCGTGAGGAGGGGAAAC 27726 | |||| ||| ||||| || || || ||| Sbjct 2003 ACACCCGCTTCGTCGTCAGCAGCGGGAAC 1975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369329708717603