Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_030921.1 Length=49768 Score E Sequences producing significant alignments: (Bits) Value seq12390 80.6 8e-11 >seq12390 Length=60018 Score = 80.6 bits (88), Expect = 8e-11 Identities = 124/177 (70%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 42221 CGTGACGAGCCCGCCCTACTTCGGTCTGCGCGACTACGGCGAGCCCGGCCAGTACGGGTT 42280 |||||| ||||||||||||| ||| ||||| || ||||||| | |||||| || | Sbjct 52664 CGTGACCAGCCCGCCCTACTACGGCCTGCGGGATTACGGCGTGGAGGGCCAGATAGGCCT 52605 Query 42281 GGAGGCCTCGCCAGCCGACTACGTCGAGACGATGCGCGCGCTTTTCGCCGAGCTGCGCCG 42340 ||||| |||| ||||| | | ||| | || || | ||| |||| ||||||| Sbjct 52604 GGAGGAAACGCCGGCCGAGTTCATCGGGCGCCTGGTCGAAGTGTTCCGCGAGGTGCGCCG 52545 Query 42341 CGTGCTCGCCGACGACGGCACCCTCTGGCTCAACCTGGGTGACAGTTACTCCGGATC 42397 || ||| |||||| || || |||| | || ||||||| || || |||| || Sbjct 52544 AGTACTCCGCGACGATGGTACGGCCTGGGTGAATATGGGTGATAGCTATGCCGGCTC 52488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159061519677380