Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_030940.1 Length=32637 Score E Sequences producing significant alignments: (Bits) Value seq35462 268 2e-67 >seq35462 Length=6070 Score = 268 bits (296), Expect = 2e-67 Identities = 440/637 (69%), Gaps = 28/637 (4%) Strand=Plus/Plus Query 31613 ACTGACAGTTCGCGCATCGCCGCTGTTGCCAGAAAGCCCGACCGAGACTGATAGCGCTTA 31672 || || |||||||||| ||||| || ||||| || || || || || |||||| | Sbjct 1310 ACGGAAAGTTCGCGCAAAGCCGCCGTCGCCAGGAACCCAGAGCGCGAGGCATAGCGATGG 1369 Query 31673 TCCACCTTCACGCGCTCATCGATCCGCTGCAGAAGGTGTTCCGGGAGCGTCGCATTAAAG 31732 || | ||| ||||||||||| || | || ||| || || || || | || || || Sbjct 1370 TCTTTTTGCACTCGCTCATCGATACGATTCAAAAGTTGCTCAGGCAGTGAGGCGTTGAAC 1429 Query 31733 CGTACGGCCTTGCCCAGGTACGGGGTCACGTCGAAGTCAACCACCGCCCATACGCCACCT 31792 | || | |||||||||||| || || | || ||||| | ||||||||| |||||||| Sbjct 1430 CTGACTGACTTGCCCAGGTAAGGAGTGAGATCAAAGTCGATCACCGCCCACACGCCACCC 1489 Query 31793 TCGAAGTCCGGATTCTTCATATGGGCGTCAACGTCCTGCGGCTGGGGTAGCTCTTCGCCG 31852 | ||||||||||||| || |||| |||| || || | ||| || ||| || | Sbjct 1490 GCAAAGTCCGGATTCTCCAAATGGACGTCGACCTCTCTAGCCTGAGGAAGCCGCTCCTCA 1549 Query 31853 TCCGTAACCAAGCCTTCGAAGTGCAAGGCCAGCGCCTCTTCTACATTGGCCAGGGCCTCG 31912 || | |||||| || |||| ||||| || | || || ||||| |||| || ||| Sbjct 1550 TCAGCAACCAATCCCTCGAGGTGCAGCGCTAAAGCTTCGCGGACATTATCCAGAGCTTCG 1609 Query 31913 GACACCGTAGCGCCGGCAGAGAAGCAACCCGGCACATCGGGCACAGTCACGCCATAGTCA 31972 || | || | ||| ||||| |||||||| ||||| || || || ||||||| || || Sbjct 1610 GAAAAGGTTGTGCCCGCAGAAAAGCAACCTGGCACGTCCGGGACGGTCACGCTGTAATCT 1669 Query 31973 GAATCAGGGTCTTTGTGTAACACCACGGGGAATTTCATGGCT-CTACTCCG--TGAG--- 32026 ||||||| ||||||||||| |||||| || |||||||| | || || | |||| Sbjct 1670 GAATCAGCGTCTTTGTGTATCACCACTGGAAATTTCATTTTTCCTCCTTTGAATGAGCCG 1729 Query 32027 ----------ATTGACC------------GGCCTCACTTGAGGCCGGCTTGTTTCAGTAT 32064 ||| ||| | | |||||| ||||| ||| ||||| || Sbjct 1730 CAGCGGGATCATTCACCACATAACCTACGGTCATCACTTCAGGCCTGCTGATTTCAAAAT 1789 Query 32065 GTTGTTCAGGGTTCCTTTCGGTATCGTCGAGGACGGATGTTGAACCGTCACCTTTCCAGG 32124 | || || ||| || || | |||| || ||||| ||||||||||| || || Sbjct 1790 GCCGTGCAAGGTCCCCTTGGCTATCTCTGATTTAGGATGAGGAACCGTCACCCGGCCGGG 1849 Query 32125 CTTTGAAGGATGTTTGAACTGGTGGTGGCTACCTTTCACCGCCACTTCATACCAGCCATC 32184 ||| | | || ||||| || ||||| || |||||| ||||||| ||| |||| ||||| Sbjct 1850 CTTGGTTGAGTGCTTGAATTGATGGTGACTGCCTTTCGCCGCCACCTCAAACCATCCATC 1909 Query 32185 CTCCAACAGCAAATCAATCACTTCCCTACTCCGCATC 32221 | ||| |||||| ||||| || || || || | |||| Sbjct 1910 CGCCATCAGCAAGTCAATTACCTCTCTGCTTCTCATC 1946 Score = 147 bits (162), Expect = 5e-31 Identities = 105/121 (87%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 2850 CTGGGGGCCTATAGCTCAGTCGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCACGGTT 2909 ||| |||||||||||||||| ||||||||||| ||||||||||||| |||||| |||| Sbjct 478 CTGAGGGCCTATAGCTCAGTTGGTTAGAGCAGGGGACTCATAATCCCTTGGTCGTAGGTT 537 Query 2910 CGAGTCCGTGTGGGCCCACCACCTTCAAAGCCGCGCACTGCGCGGCTTTCGCCTTTCTGG 2969 ||||||| ||||||||||| ||| ||||||||||| ||||||||||| | ||||||| Sbjct 538 CGAGTCCTACTGGGCCCACCATCTTGAAAGCCGCGCATTGCGCGGCTTTGTCGTTTCTGG 597 Query 2970 C 2970 | Sbjct 598 C 598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104267976673294