Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_031048.1 Length=41918 Score E Sequences producing significant alignments: (Bits) Value seq36294 111 4e-20 >seq36294 Length=49020 Score = 111 bits (122), Expect = 4e-20 Identities = 204/295 (69%), Gaps = 13/295 (4%) Strand=Plus/Minus Query 26908 GCCATTCATGCCCACGTTGATTTCAGTGGTGTAGCGCTCAACGCCTTGCTGATCAGTCCA 26967 ||| | |||| | || |||||| |||||||| |||| | ||| | | || ||| Sbjct 39194 GCCTTGCATGTCGACCACGATTTCGGTGGTGTAACGCTTGATGCCGTCTTTTTC---CCA 39138 Query 26968 TTTACGGGTTCGCAGACCGCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTATTCACC 27027 | |||||| |||| |||||| ||| | |||| |||||||||||||||||||| Sbjct 39137 CTCGCGGGTTTGCAGCTTGCCTTCGATGTAGACCTGCGAACCTTTGCGCAGGTATTCACC 39078 Query 27028 AGCGATTTCCGCCAGCTTGCCGAAGAT-GACAACGCGGTGCCATTCCGTCTGCT----CT 27082 ||||| || || | ||||||||| || |||| | ||||||||||| || | || || Sbjct 39077 GGCGATCTCTGCAACCTTGCCGAACATCGACA-CACGGTGCCATTCGGTTTTCTCGACCT 39019 Query 27083 TTTGGTTCGCCTGTGGCCTTATCTTTCCACTTTTCGGTTGTGGCAATGCTGAGATTGGCA 27142 | || ||| || ||| || |||||| ||| | || || | || || |||| Sbjct 39018 TCTG----GCCGGTTTGCTTGTCGGTCCACTGCTCGCTGGTCGCCAGACTCAGGTTGGTC 38963 Query 27143 ACTGCGCCACCTGACGGCATGTAGCGCACTTCTGGATCGTTGCCTAAATTACCGA 27197 || || ||| ||||| |||||| ||||| ||||| | ||| | |||||| Sbjct 38962 ACGGCATTACCGTTCGGCAAGTAGCGAACTTCGGGATCCTGGCCGCATGTACCGA 38908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133953276575280