Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_031058.1 Length=58566 Score E Sequences producing significant alignments: (Bits) Value seq8567 430 5e-116 >seq8567 Length=29384 Score = 430 bits (476), Expect = 5e-116 Identities = 876/1282 (68%), Gaps = 37/1282 (3%) Strand=Plus/Minus Query 2311 GCAAGATCATTCTAGAACGCCAGATGGCGCGCTGGTATCAGCTGAAGGACCACGAGGTTC 2370 |||| | || || || || ||| || | |||||||| | |||||||| ||| || | Sbjct 16212 GCAACCTGATGCTTGATCGTCAGCTGTCCCGCTGGTACCCACTGAAGGATCACCCAGTGC 16153 Query 2371 AGCTTCGACTGTTGCGTGCCGTTGAAGACGGTGTGCGCTTCCCCATTGTGCCCGCAGGAC 2430 | || ||| || || || || || | ||||| || | ||||||||||| | Sbjct 16152 AACTCGCCCTGGTGGCGGCGGTATCGGAAGGAATTCGCTTTCCACTGGTGCCCGCAGGCC 16093 Query 2431 GACGCTCAGGCAAGACGGAACGCGCCAAGCGTTTTCTG-TCACGTCAGGCGATGTGGTAT 2489 | || || ||||| || || |||||| || || | | | ||||| | ||| Sbjct 16092 GTCGTAGCGGAAAGACTGAGCGGTTCAAGCGCTTCGTGGTGAAG-CAGGCATCGGCGTAC 16034 Query 2490 CCGGGCGAGAAGTATTTCGCAGCCGCGCCCACGTACAACCAGGCCAAGAAGATCTGGTGG 2549 ||| | ||| ||||| || || || ||| || |||||| ||||| |||| ||| Sbjct 16033 AGCGGC---ATGTACTTCGCCGCGGCACCAACGCACGCCCAGGCGAAGAAAATCTTCTGG 15977 Query 2550 GACGACCTCAAGGCGCTGACGCTGTCGTGTATGCACCCCAAGAAGCCCAGCGAGTCCGAA 2609 || ||||||||||| | ||||| | || |||||| | | ||| ||||||||| Sbjct 15976 GATGACCTCAAGGCTTTCACGCTCTGCTGCATGCACAGCCGCAGGCCGTCCGAGTCCGAC 15917 Query 2610 CTCAAGATCTACCTGCCCAACGGGACCGAGATTCACATCATCGGTCTGGACCAGGACCAG 2669 || | ||||||||| |||||| | |||||||||| ||||||| |||||| || Sbjct 15916 CTGATCATCTACCTGGACAACGGCAGCGAGATTCACGTCATCGGCCTGGACAAG------ 15863 Query 2670 CCCCAGCGGATTGAAGGTATCAACTGGACAGGCGGTGTGATCGACGAAATTGCGGACGTG 2729 || ||||| ||||| |||||| |||||| ||||| | ||||||||| | |||||| | Sbjct 15862 CCGCAGCGAATTGAGGGTATCCCCTGGACCGGCGGCGGCATCGACGAATTCGCGGACATC 15803 Query 2730 AAGGGTGAGGCGCTGCAAGCGAACATCATGCCCGCGCTCAACACCGTGAATCCGACGCGC 2789 ||| || || | | || ||||| | || ||||| |||||||| || || || Sbjct 15802 AAGCCGGATGCCTGGGAGGCAAACATTCTCCCTGCGCTGAACACCGTCAACCCAACCATG 15743 Query 2790 CCGTACTATCGGGCCTGGTGCTGGTTCATTGGTGTGCCCGACGGTCTGAACCACTATTAC 2849 ||| | || ||||||||||||||||| | || ||||| ||||| ||||||||||||||| Sbjct 15742 CCGGATTACCGGGCCTGGTGCTGGTTGCTCGGGGTGCCGGACGGCCTGAACCACTATTAC 15683 Query 2850 GACATGGCGGAATATGCACGC----ACCGCCAACGACCCCGAC-TGGGCGCTGTTCCACT 2904 ||| | | | ||||| || | | ||| ||||| || | ||| |||| |||| Sbjct 15682 GACCT--CTG--CATGCAGGCTGAGTCGGGCAATGACCCGAACTTTCGCG-TGTTTCACT 15628 Query 2905 GGACGTCGGAAGAGATTCTCCCGCCAGACGTCATTGAAGCTGCGAAGCGCACCATGTCGC 2964 ||| ||| | |||||||| ||| | ||||| || || || |||||| |||||||| Sbjct 15627 GGAAGTCTGCCGAGATTCTGCCGGCTGACGTAATGGACGCAATGAAGCGGGCCATGTCGG 15568 Query 2965 GGAAGCAGTACAATCAGGAATATCG-AGCGAGCTTCGAGACCGCCAGCGGTCGTATCTAT 3023 ||||||| ||| ||||||| ||| |||| ||||| || || || || ||||| Sbjct 15567 CCAAGCAGTTCAAGCAGGAAT-TCGAAGCGTCGTTCGAAACAGCGTCTGGCCGGATCTAC 15509 Query 3024 GAGGACTACTCGAAAGAGAATTTCAC-AACCGAGCGGATCCTCCCTCACGAAGCGCTGCA 3082 ||||||||| || | ||| ||| || ||| || ||||| || |||| Sbjct 15508 GAGGACTACAGCAAGGCGAACACCACGAATGCAGC-CATTGAGCCTCATGAGCAGCTGAT 15450 Query 3083 CTGGACGCACGACCAGAACTTCACCCCGCTGAGCTCGGCTATTGTGGTCATCCGCAATGG 3142 |||| |||||||||||||||||| ||||| || || || | ||| ||||||| Sbjct 15449 GTGGATGCACGACCAGAACTTCACGCCGCTCTCGTCCGCGATCGGTGTCCGGCGCAATGA 15390 Query 3143 AGTC-----CCCTTCT-TCCTCGATGAGATCGTTCTTGAGAGCGCAGTGAGCCGGCAGTC 3196 | | || || | | || ||||||||||| || ||||| || |||||| Sbjct 15389 CGGCAAAGACCTTTATCTGCTGGATGAGATCGTGCTGATCAGCGCGGTATCGAAGCAGTC 15330 Query 3197 GGCAATCGAGTTCGTTGAGAAGTACAAGGAACACAAGAACAAG-ACAGTCTATATCTACG 3255 || |||||||| || |||| |||||| |||||||||||| || ||| || || | Sbjct 15329 AGCCGCTGAGTTCGTGGAAAAGTTCAAGGATCACAAGAACAAGCACGTTCT-GATTTATG 15271 Query 3256 GTGACCCAGCGGGTCGCGCGGGTGAGAAGCACGGGCACAAATCCGATTACACTGAGATCG 3315 | ||||| |||||| || |||||||| ||||| ||| || || ||||| || |||| Sbjct 15270 GCGACCCGGCGGGTAAGGCTGGTGAGAAACACGGCCACGCCTCTGACTACACCGACATCG 15211 Query 3316 AAGACGTGCT--ACGCTTGCACGGCTGGAAGTTCGAGCGGCGCGTGCGTCCTGCGCACCC 3373 | | |||||| | || | || ||| || | ||| || || || || || Sbjct 15210 AGGGCGTGCTGAAGGC--CAATGGTTGGGCGTACACGCGCAAGGTCAAGCCGGCTCATCC 15153 Query 3374 TGCTATCAAGGACCGCCAGAACGCTGTACGTGCGATGATCTGCAATGCGAAAGGCGAAGT 3433 | |||||||| || |||||||| || || |||| |||| | || ||||| Sbjct 15152 GTCCATCAAGGATCGGCAGAACGCAGTCCGGGCGAAGATCCTGACCGCTTCGGGCGAGAC 15093 Query 3434 GAGGTTGAAGGTGAATCCTCAGACTGCGCTGTGGTGCCACAAAGGCTTGAGCACTGTGCA 3493 || || | || || || || | ||||||||||| ||| |||| || || || Sbjct 15092 CAGCCTGTTCATCAACCCGGTCACCGCTCCCTGGTGCCACAAGGGCCTGAGTACGGTCCA 15033 Query 3494 GCTCCAGGCAGGTTCGTCTTTCCAAGAGGATCAAAAGAACCAGTATCAGCACATCACCAC 3553 ||| || || ||| | ||||| || || || || ||| | || |||||||||||||| Sbjct 15032 GCTTCAAATGGGCTCGACCTTCCAGGAAGACCAGAAAAACGACTACCAGCACATCACCAC 14973 Query 3554 AGCGATCGGGTATTTTATTGAC 3575 ||||| || |||| || ||| Sbjct 14972 GGCGATTGGCTATTGCATCGAC 14951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187201942965568