Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq16927 105 4e-18 >seq16927 Length=19327 Score = 105 bits (116), Expect = 4e-18 Identities = 187/270 (69%), Gaps = 2/270 (1%) Strand=Plus/Minus Query 830 AAGGATGATCGCACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCTGCGGTACGAC 889 |||| || ||||||||||||||||| | | ||| | | ||| | ||| | | Sbjct 16639 AAGGGCGACCGCACCGGCACCGGCACCAAGGCCGTGTTTGCCCGTCAGTTTCGGCATAGC 16580 Query 890 CTCACCGAGGGCTTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAATCGGTTGCGTAC 949 | |||| |||||||||||| | ||||| ||| | ||||||||| | || || Sbjct 16579 TTGGCCGACGGCTTCCCGCTGCTGACCACCAAGAAGCTTCACTTCAAAAGCATCGCCAAC 16520 Query 950 GAACTTCTGTGGTTCCTCAGTGGCGACACGAACGTGAAGGCGCTCAACGACAACGGCGTC 1009 ||| | | ||| | | |||||| |||| ||| | ||| ||| ||||| || ||||| Sbjct 16519 GAATTGATCTGGATGTTGAGTGGCAACACCAACATCAAGTGGCTGAACGAAAATGGCGTG 16460 Query 1010 ACCATCTGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGCGCAG 1069 ||||||||||| |||||| || | ||| |||| || || || ||||||| |||| Sbjct 16459 CGTATCTGGGACGAATGGGCCACCGAAGACGGCGACCTGGGCCCGGTGTACGGCGAGCAG 16400 Query 1070 TGG-CGGCACTGGCATGTCGAGGACGGAGG 1098 ||| | || ||||| | ||||||| || Sbjct 16399 TGGACCGC-CTGGCCCACCAAGGACGGCGG 16371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 295988954581113