Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_031249.1 Length=50127 Score E Sequences producing significant alignments: (Bits) Value seq12390 89.7 2e-13 >seq12390 Length=60018 Score = 89.7 bits (98), Expect = 2e-13 Identities = 117/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 43023 AAGAACCTCATGGGAATGCCGTGGCGCGTCGCGTTCGCGCTCCAAGACGACGGCTGGATA 43082 ||| || | ||||||||||| |||||| | || || || || || ||||| |||||| Sbjct 52339 AAGGACATGATGGGAATGCCCTGGCGCTTGGCCTTTGCCCTGCAGGACGATGGCTGGTAT 52280 Query 43083 CTCCGCAACGACGTCATCTGGCACAAGCCAAACGCTATGCCGGAGAGCATCACCGACCGA 43142 || ||| | ||| |||| ||||| |||||||| | ||||||||||| || |||||| Sbjct 52279 CTGCGCCAAGACATCATTTGGCATAAGCCAAATCCAATGCCGGAGAGTGTCCGCGACCGC 52220 Query 43143 CTCAGTGTTCGCTACGAGCACGTATTCATGCTGTCCAAGTCG 43184 || | | ||||| || | || ||||| ||||||| Sbjct 52219 TGCACTAAGGCCCACGAGTACATTTTTTTGCTGAGCAAGTCG 52178 Score = 82.4 bits (90), Expect = 2e-11 Identities = 119/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 42707 CGTGACGAGCCCGCCCTACTTCGGTCTGCGCGACTACGGCGAGGACGGCCAGTACGGGTT 42766 |||||| ||||||||||||| ||| ||||| || ||||||| ||| |||||| || | Sbjct 52664 CGTGACCAGCCCGCCCTACTACGGCCTGCGGGATTACGGCGTGGAGGGCCAGATAGGCCT 52605 Query 42767 GGAGGCCTCCCCAGCCGAATACGTCGAAACGATGCGAGCACTGTTCGCCGAACTGCGCCG 42826 ||||| | || ||||| | | ||| || | | ||||| ||| ||||||| Sbjct 52604 GGAGGAAACGCCGGCCGAGTTCATCGGGCGCCTGGTCGAAGTGTTCCGCGAGGTGCGCCG 52545 Query 42827 CGTGCTCGCCGACGACGGAACCCTCTGGCTCAACTTGGGTGACAGCTA 42874 || ||| |||||| || || |||| | || ||||||| ||||| Sbjct 52544 AGTACTCCGCGACGATGGTACGGCCTGGGTGAATATGGGTGATAGCTA 52497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160209782005234