Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_031924.1 Length=47564 Score E Sequences producing significant alignments: (Bits) Value seq36294 89.7 2e-13 >seq36294 Length=49020 Score = 89.7 bits (98), Expect = 2e-13 Identities = 104/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 36537 AGCTGGCCTTCGATGTAAACCTGCGAACCTTTTCGAAGGTATTCTCCTGCAACTTCCGCA 36596 |||| |||||||||||| |||||||||||||| || |||||||| || || | || ||| Sbjct 39124 AGCTTGCCTTCGATGTAGACCTGCGAACCTTTGCGCAGGTATTCACCGGCGATCTCTGCA 39065 Query 36597 AGTTTCCCGAATAT-GACAATACGATGCCACTCTGTCTGTTCTTTCTTTTCTCCTGTCTG 36655 | || ||||| || ||| | ||| ||||| || || | || ||| | || || || Sbjct 39064 ACCTTGCCGAACATCGAC-ACACGGTGCCATTCGGTTTTCTCGACCTTCTGGCCGGTTTG 39006 Query 36656 CTTATCTTTCCACTGCTC 36673 ||| || |||||||||| Sbjct 39005 CTTGTCGGTCCACTGCTC 38988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152012020594956