Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endotrypanum_20monterogeii_20[genbank_20GCA_5F000333855.2_202016-09- 30] 1,959 sequences; 32,520,418 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq33 129 7e-25 >seq33 Length=510537 Score = 129 bits (142), Expect = 7e-25 Identities = 387/589 (66%), Gaps = 24/589 (4%) Strand=Plus/Minus Query 145693 ACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGG 145752 |||||| || | || ||||| ||||| || ||| ||| | || || ||||| ||| | Sbjct 366724 ACGTGGCTGCGATACACGTGAGCGTCACCGAGGGTGTGCACGAGCTCGCCGGG-TCGTAG 366666 Query 145753 CCC-GTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCAC 145811 ||| || | || | | | ||| ||||| || ||| ||| ||||| ||||| || Sbjct 366665 CCCTGTCGCCTTCGCAATAAGGATGGTGAGCAGAGAATAGGAGGCGATGTTAAAGGGAAC 366606 Query 145812 CCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCC-CGCCCGC-- 145868 || || |||||||| | ||| || ||||||| | |||||| |||||| || | | Sbjct 366605 GCCGAGACCCATGTCACACGAACGTTGGTACATCATGCAGGACAGCTCCTTCGTCTCCGT 366546 Query 145869 ---CACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGC 145925 |||||||||||| || | |||||| ||||| || ||||| ||||| | Sbjct 366545 GTTCACGTAGAACTGAGCGAGCAAGTGGCACGGCGGGAGCGCCATCTTGGGCAACGCGCT 366486 Query 145926 CGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTC-TCGGGGTTCCTCTTGA---TCTCCC 145981 ||||||||||| |||| || ||| | | | || | ||||| |||||| |||| Sbjct 366485 TGGGTTCCAGGCAGTGAAGAGGAGACGGC-GATCGTTCGGGTTTTTCTTGAGGGTCTCGA 366427 Query 145982 CTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGT 146041 | || || | ||| ||| |||||||| | || ||| | || | | || || Sbjct 366426 CAAT---GTACTTGATCTGATCCACGCCTTCGCCATCGTAGTTTGCATCAAACCCCCTGT 366370 Query 146042 ACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCC----CCGGGC 146097 || | |||||||| || | ||||||||| ||||| || || || || ||| | Sbjct 366369 ACTCCGCCCCGAAATGACGCCACTGGAAGCCGTATACTGGTCCGAGATCCATTTCTTTAT 366310 Query 146098 TCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATC 146157 || ||||| || || | | ||||||| || || || ||||| ||||||| || Sbjct 366309 TCTCTGTG----AGACCACGACTGTCGAGGAACTCGCGCGAGCCGTTACCGTCCCAAATA 366254 Query 146158 TTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGC 146217 | || || | | | ||| | | | |||| || | || ||||||||||| Sbjct 366253 TGGATATCCTTGTCCGCGAGGATCTGCGCATTCGTGTTGCCGCGGAGAAACCAGAGCAGT 366194 Query 146218 TCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 || || || || | ||| ||||| | |||||| |||| || |||| Sbjct 366193 TCCTCACACACACCGCGCCAAAAGACACGCTTGGTCGTCAACAACGGGA 366145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590062350494360