Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endotrypanum_20monterogeii_20[genbank_20GCA_5F000333855.2_202016-09- 30] 1,959 sequences; 32,520,418 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq33 127 2e-24 >seq33 Length=510537 Score = 127 bits (140), Expect = 2e-24 Identities = 277/408 (68%), Gaps = 14/408 (3%) Strand=Plus/Minus Query 20934 ACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTC--A 20991 |||||| || || ||||| |||||||| | ||||||||| | || || ||||| | Sbjct 366724 ACGTGGCTGCGATACACGTGAGCGTCACCGAGGGTGTGCACGAGCTCGCC--GGGTCGTA 366667 Query 20992 GGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGA 21051 | || || | | || || || || || || | ||| |||||||||||| || | Sbjct 366666 GCCCTGTCGCCTTCGCAATAAGGATGGTGAGCAGAGAATAGGAGGCGATGTTAAAGGGAA 366607 Query 21052 CCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCC-----CCCCG 21106 | ||||| |||||||| || | ||||||| | ||||||||||||| | ||| Sbjct 366606 CGCCGAGACCCATGTCACACGAACGTTGGTACATCATGCAGGACAGCTCCTTCGTCTCCG 366547 Query 21107 AG-CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATC-CGCGCGAGGTCC 21164 | |||||| |||||| | | ||| || || ||||| |||||| | || | | | Sbjct 366546 TGTTCACGTAGAACTGAGCGAGCAAGTGGCACGGCGGGAGCGCCATCTTGGGCAACG--C 366489 Query 21165 GC-GGGGTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGATC 21223 || |||||||| || | | || || ||||||| || | || | || Sbjct 366488 GCTTGGGTTCCAGGCAGTGAAGAGGAGACGGCGATCGTTCGGGTTTTTCTTGAGGGTCTC 366429 Query 21224 CACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTA 21283 || | ||| | ||| ||||| || | || |||||||| || || ||||||||| Sbjct 366428 GACAATGTACTTGATCTGATCCACGCCTTCGCCATCGTAGTTTGCATCAAACCCCCTGTA 366369 Query 21284 CTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATC 21331 ||||||||| ||||| | ||||||||| ||||| || || || ||||| Sbjct 366368 CTCCGCCCCGAAATGACGCCACTGGAAGCCGTATACTGGTCCGAGATC 366321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427765786714320