Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endotrypanum_20monterogeii_20[genbank_20GCA_5F000333855.2_202016-09- 30] 1,959 sequences; 32,520,418 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq33 98.7 7e-16 >seq33 Length=510537 Score = 98.7 bits (108), Expect = 7e-16 Identities = 259/393 (66%), Gaps = 7/393 (2%) Strand=Plus/Minus Query 25446 TAGACGTGAGCGTCTCCCAGAGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAA 25505 || ||||||||||| || || ||||| || | ||| || ||| |||||| || | | Sbjct 366712 TACACGTGAGCGTCACCGAGGGTGTGCACGAGCTCGCCGGGTCGTAGCCCTGTCGCCTTC 366653 Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565 || || | | ||||| ||| | ||| ||||||||||||||| || |||| |||||| Sbjct 366652 GCAATAAGGATGGTGAGCAGAGAATAGGAGGCGATGTTAAAGGGAACGCCGAGACCCATG 366593 Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCT-CTTCGTC-----GCTCACGTAAAA 25619 | | | ||| | ||||| | | || || |||| ||||||| | ||||||| || Sbjct 366592 T-CACACGAACGTTGGTACATCATGCAGGACAGCTCCTTCGTCTCCGTGTTCACGTAGAA 366534 Query 25620 CTGACACATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTTAGGGTTCCAGGC 25679 |||| | || |||||| || || || || | ||| | | ||||||||||| Sbjct 366533 CTGAGCGAGCAAGTGGCACGGCGGGAGCGCCATCTTGGGCAACGCGCTTGGGTTCCAGGC 366474 Query 25680 GCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGATAAGATCCGCGGTGTTTTGCAG 25739 | || || | | || | ||||| | | ||| || | ||| | | Sbjct 366473 AGTGAAGAGGAGACGGCGATCGTTCGGGTTTTTCTTGAGGGTCTCGACAATGTACTTGAT 366414 Query 25740 CTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATA 25799 ||||||||| || || ||||| ||| | || ||||||| || ||||||| Sbjct 366413 CTGATCCACGCCTTCGCCATCGTAGTTTGCATCAAACCCCCTGTACTCCGCCCCGAAATG 366354 Query 25800 CCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 | ||||||||| ||||| || ||||| || || Sbjct 366353 ACGCCACTGGAAGCCGTATACTGGTCCGAGATC 366321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340129479108507