Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endotrypanum_20monterogeii_20[genbank_20GCA_5F000333855.2_202016-09- 30] 1,959 sequences; 32,520,418 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq21 170 5e-37 >seq21 Length=1031504 Score = 170 bits (188), Expect = 5e-37 Identities = 500/761 (66%), Gaps = 16/761 (2%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| ||||| || || || | | |||||| || || | || || || ||| || Sbjct 213020 TTCACTCACGCGACTCCGACTCTCTTCAATGCCGGTACGCCAAAGCCGCAAATGAGCTCA 213079 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 |||||||| | | || || || |||||||||||| | ||||| || ||| | Sbjct 213080 TGCTTTCTGGTTGCATCCAAAGATGACAGCATCGAGGGTATTTACGACACGCTCAAGGAG 213139 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGG--TGTATCGATCCACAATGTTCGTG 363724 ||||| || || ||| || || || ||||| || || | ||||| | || | Sbjct 213140 TGTGCCCTGATCAGCAAAGCAGCCGGTGGCATTGGCCTGCAT--GTGCACAACATCCGCG 213197 Query 363725 CACAGAACAGTTACATTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTT 363783 | || ||| |||||| |||||| | | ||| ||||| ||||| || || ||| | Sbjct 213198 CGGAGGGCAGCTACATTGCCGGCAC-GAACGGTACGTCGAACGGGCTCGTGCCGATGTTG 213256 Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843 || || || |||| || ||| | ||||| ||||||||||| || |||||||| || || Sbjct 213257 CGGGTCTTCAACAACACCGCGCGCTACGTGGACCAGGGTGGCGGTAAGCGCAAGGGCGCC 213316 Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA 363903 || || || || || ||||| || ||||| ||||||| || || ||| | Sbjct 213317 TTCGCCATCTACCTTGAGCCGTGGCACGCCGACATTTTTGGCTTCCTGTTGCTGAAGCGC 213376 Query 363904 AACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963 |||||||| || || || |||||| || || || ||||| | |||||||| | || Sbjct 213377 AACACGGGCAAGGATGATCAGCGTGCCCGCGACCTCTTCTACGGGCTTTGGGTCCCAGAT 213436 Query 363964 CATTTTATGAAGCGCGTG--GAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAAT 364021 | || |||| || ||| ||| ||| || ||| | ||| | ||| ||| | | Sbjct 213437 CTGTTCATGACACGGGTGAAGAGCGAGG--GGATGTGGACGCTCATGGACCCCCACAACT 213494 Query 364022 GTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAAT 364081 | || ||||| |||| | || | | | | || || ||| | | ||| || Sbjct 213495 GCCCGGGTCTCAGCGATTGCTACGGCGCGGCATTTAATGAGCTTTACCAGAGGTACGAGG 213554 Query 364082 CGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATT 364141 | ||||| | | | ||| || ||||| ||| | | ||||||||||| |||| | Sbjct 213555 CCGAGGGTCGTGGTAAGAGGACTATACCCGCGCAGGATTTGTGGTTTGCCATACTGGAGT 213614 Query 364142 CGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCA 364201 ||| || ||||| || || || || | | ||| || || ||| || || | Sbjct 213615 CGCTAATCGAGACGGGCGGCCCTTACATTCTCTTCAAGGACCAATGTAACGAGAAATCTA 213674 Query 364202 ACCAGCAGCACCTTGGTACAATTCAGCAGAGC---AACCTATGTACCGAGATTATTGAAT 364258 ||||| | ||||||| || | ||| || || ||||| || ||||||||| | || | Sbjct 213675 ACCAGAGGAACCTTGGGACCA-TCA--AGTGCTCGAACCTGTGCACCGAGATTGTCGAGT 213731 Query 364259 ACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCG 364299 |||| || | ||||| || || || ||||| |||||| Sbjct 213732 ACACTAGCCCGGGGGAGACAGCGGTGTGCAACCTCGCGTCG 213772 Score = 104 bits (114), Expect = 6e-17 Identities = 206/305 (68%), Gaps = 0/305 (0%) Strand=Plus/Plus Query 364732 CGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAAC 364791 |||||||||||| | || ||||||||||| || || || | ||||| ||||| ||| Sbjct 214217 CGCAACTCCCTCCTAGTCGCCCCCATGCCCACCGCATCCACCTCGCAGATTCTCGGCAAC 214276 Query 364792 AACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAA 364851 ||||||||||| || || ||||| ||| ||||| || || || || ||| || Sbjct 214277 AACGAGTGCTTTGAGCCCTTTACCTCGAATATTTATGTTCGTCGTGTGCTGAGCGGGGAG 214336 Query 364852 TTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGAC 364911 ||||| || || || |||||||| || | ||| || || ||| || || ||| || Sbjct 214337 TTTCCTGTGGTGAACAAGTACCTGGTGATGGACCTCATCGCCCGTGGCCTCTGGACCGAA 214396 Query 364912 AGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCA 364971 ||| |||| | ||||| | || || |||||| ||||||| || | ||| Sbjct 214397 GAGATGCGGAACGAGATCATTTCGTACAACGGGTCTGTGATGAACATTGAAGCGATCCCA 214456 Query 364972 GAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGAT 365031 || ||| | | |||| ||| |||||||| ||| || ||| || || || Sbjct 214457 AGCGACCTGCAAGATCTTTATCGAACTGTATGGGAGATTCCCCAGCGTTGGCTGATCGAC 214516 Query 365032 ATGGC 365036 ||||| Sbjct 214517 ATGGC 214521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303320886231938