Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endotrypanum_20monterogeii_20[genbank_20GCA_5F000333855.2_202016-09- 30] 1,959 sequences; 32,520,418 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq25 91.5 1e-13 seq36 82.4 6e-11 >seq25 Length=1382006 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244 ||| || || || || |||||||| || || || ||| || || || || || || Sbjct 844052 CGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGCGTGCGACCCTCCTCCAGCTGCTTGCC 844111 Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304 ||| |||| || ||||| |||||||| || ||||| || ||||| |||||| || Sbjct 844112 GGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTGGCCTT 844171 Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 | | || | || ||| | || ||||| || | | | ||| ||||||||||| || Sbjct 844172 GACATTCTCGATCGTATCGCTCGACTCGACTTCGAGCGCAATCGTCTTGCCGGTCAGCGT 844231 Query 114365 TTTTACAAAAATCTGCATGG 114384 || ||||| |||||||||| Sbjct 844232 CTTCACAAAGATCTGCATGG 844251 >seq36 Length=555156 Score = 82.4 bits (90), Expect = 6e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244 ||| || || || ||||||||||| || | || || || || || || || || Sbjct 340592 CGTGGACTCCTTCTGAATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCC 340651 Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304 ||| |||| || ||||| |||||||| || ||||| || ||||| ||||| || Sbjct 340652 GGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTT 340711 Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 | | || | || ||| | || || || || | | | ||| |||||||||||||| Sbjct 340712 GACATTCTCGATCGTATCGCTCGACTCAACCTCGAGCGCAATCGTCTTGCCGGTCAGAGT 340771 Query 114365 TTTTACAAAAATCTGCATGG 114384 || ||||| |||||||||| Sbjct 340772 CTTCACAAAGATCTGCATGG 340791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420124369159908