Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endotrypanum_20monterogeii_20[genbank_20GCA_5F000333855.2_202016-09- 30] 1,959 sequences; 32,520,418 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq21 201 2e-46 >seq21 Length=1031504 Score = 201 bits (222), Expect = 2e-46 Identities = 948/1473 (64%), Gaps = 57/1473 (4%) Strand=Plus/Minus Query 243986 GGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGA--TGAGCTGGGTGCGCATGT 244043 |||| | |||| |||||| ||| || || |||| |||| ||| || | | ||||| | Sbjct 214455 GGGATCGCTTCAATGTTCATCACAGACCCGTTGT--ACGAAATGATCTCGTTCCGCATCT 214398 Query 244044 TATCGTTCCACAGGCC-CAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCACCTGA 244102 ||| |||| ||||| | ||| | | | || ||||||| | |||||||||| || Sbjct 214397 CTTCGGTCCAGAGGCCACGGGCGATGAGGTCCATC-ACCAGGTACTTGTTCACCACAGGA 214339 Query 244103 AACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCC 244162 ||||| || |||||| || || || | || | | | ||||| | || ||| Sbjct 214338 AACTCCCCGCTCAGCACACGACGAACATAAATATTCGAGGTAAAGGGCTCAAAGCACTCG 214279 Query 244163 GTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTC 244222 ||||||| || ||||||| ||| || || |||||||| | || || || ||| Sbjct 214278 TTGTTGCCGAGAATCTGCGAGGTGGATGCGGTGGGCATGGGGGCGACTAGGAGGGAGTTG 214219 Query 244223 CTCACGCCGTGCCTCTGG-ATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAG 244281 | || |||| | || | | | || |||| || ||||||||| || | | Sbjct 214218 CGCATGCCG-GTCTGTACCACCCTCTGTTTGAGTGCGGCCCAGTCCCATCGACCACTGTG 214160 Query 244282 -GTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGC--AGCCCCTTGCTGACGGGGCT 244338 | ||||| ||| ||||||||||||||||||| ||| | || | ||| | Sbjct 214159 CGGCCTCGGGTTCTT----CCACATGTCAAACTGCAGCGTAGCTGCA-GCGGCCGGAGAC 214105 Query 244339 GCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCT-CTCGTCGAGGG 244397 || || | | ||| || || || | ||||||| || | | | || | | Sbjct 214104 -CCTTCAAAACTGTCGTACGGCCCCTCCTCCGTTGCCAGCTC-CATCGACGCCTCCACAG 214047 Query 244398 CGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCA--TGTCGCGGGCCTTGCCGCAGGT 244455 ||||| |||| | |||||||||||| | ||||| || |||| || | | || | Sbjct 214046 CGGCGAAGTACAAAGTCTCGAAGATCTCCGCGTTCAGCTGCCGCGCCCCCTCCGACA--T 213989 Query 244456 GAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGG 244515 |||||| | | ||| | |||||| ||| || || || ||||| || ||| ||||||| Sbjct 213988 GAAGGGCAGCCGCATGAGAATGAAGGTGTCCGCTAGGCCTTGCACACCAATGGCGATGGG 213929 Query 244516 TCTGTG--TC-GCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGAT 244572 | ||| || | ||| | ||||| | ||| |||||||||| |||||| ||| || Sbjct 213928 GCGGTGCTTCAGGTTGCTCAAGCGCGCCGTTTC---CACGGGGTAATAGTTGCGGTCAAT 213872 Query 244573 CACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTA 244632 ||| || | |||||| |||||| | || ||| | || ||| || | | | Sbjct 213871 CACGCGATTTAAGTTGCGTGTGATCTGCCTCACCACGGTGTACATCAGTTGGTGATTGAA 213812 Query 244633 CTCGTAGGGATCCTCGGCGATGGTGATCCTCA-CAAACTCGTTGAGGGCGACGCTGGCCA 244691 |||| | | ||| || | || | | |||| || || || | Sbjct 213811 CTCGC---GCTTCTCAACGTCGACGAAGCGCGGCAAA----------GCAACCGACGCGA 213765 Query 244692 GGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTAC 244751 ||||||| || || |||| ||| | | ||||||| ||||||||||||||| ||||| Sbjct 213764 GGTTGCACACCGCTGTCTCCCCCGGGCTAGTGTACTCGACAATCTCGGTGCACAGGTTCG 213705 Query 244752 TGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGA 244811 |||||||||||| || |||| | || || || || |||| || ||||||| ||| Sbjct 213704 AGCACTTGATGGTCCCAAGGTTCCTCTGGTTAGATTTCTCGTTACATTGGTCCTTGAAGA 213645 Query 244812 GCATG-AAGGGCCCCCCGGTCTCGAGCTGGGCGACG--AGGACGCTGTTCCAGAGGTCCC 244868 | ||| ||||||| |||| |||||| | ||||| || | | ||| | ||| Sbjct 213644 GAATGTAAGGGCCGCCCG-TCTCGA--TTAGCGACTCCAGTATGGCAAACCACAAATCCT 213588 Query 244869 TAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGA 244928 || | ||||| | | ||||| |||||||| | ||| || | | | Sbjct 213587 GCGCGGGTATAGTCCTCTTACCACGACCCTCGGCCTCGTACCTCTGGTAAAGCTCATTAA 213528 Query 244929 ACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACT 244988 | | | ||| || ||| || || ||||| ||| |||||| ||||| Sbjct 213527 ATGCCGCGCCGTAGCAATCGCTGAGACCCGGGCAGTTGTGGGGGTCCATGAGCGTCCACA 213468 Query 244989 CGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGT 245048 || || ||| |||| |||||| || || |||| ||| || | | |||||||| Sbjct 213467 TCCCCTCGCTCTTCACCCGTGTCATGAACAGATCTGGGACCCAAAGCCCGTAGAAGAGGT 213408 Query 245049 CCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGT 245108 | | || | ||| || ||| ||| ||||| | ||||| || ||| |||| | || Sbjct 213407 CGCGGGCACGCTGATCATCCTTGCCCGTGTTGCGCTTCAGCAACAGGAAGCCAAAAATGT 213348 Query 245109 CGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGT 245168 || ||||||| ||||| | ||||| |||| |||||| ||||| ||| ||||||| Sbjct 213347 CGGCGTGCCACGGCTCAAGGTAGATGGCGAAGGCGCCCTTGCGCTTACCGCCACCCTGGT 213288 Query 245169 CCACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGC 245228 |||| | | || |||||||| |||| | ||||| | ||||| || | Sbjct 213287 CCACGTAGCGCGCGGTGTTGTTGAAGACCCGCAACATCGGCACGAGCCCGTTCGACGTAC 213228 Query 245229 CGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGT--TGCTGATGGACATGCCTAG 245286 |||| ||||| |||||| ||||| | | || || ||| ||| || ||| | Sbjct 213227 CGTTCGTGCCGGCAATGTAGCTGCCCTCCGCGCGGATGTTGTGCACATG--CAGGCCAAT 213170 Query 245287 TCCGCCGGCGTGC-TTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCA 245345 || ||||| ||| ||| ||| ||||| || ||||| ||||| || ||||| | Sbjct 213169 GCCACCGGC-TGCTTTGCTGATCAGGGCACACTCCTTGAGCGTGTCGTAAATACCCTCGA 213111 Query 245346 TGCTGTCCGACTT-CATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCAC 245404 ||||||| || ||| | ||||||||| ||| || || ||||| || | | Sbjct 213110 TGCTGTCATCTTTGGATG-CAACCAGAAAGCATGAGCTCATTTGCGGCTTTGGCGTACCG 213052 Query 245405 GAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAG 245437 | ||||| ||||| || | ||||| || ||| Sbjct 213051 GCATTGAAGAGAGTCGGAGTCGCGTGAGTGAAG 213019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944316075493840