Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endotrypanum_20monterogeii_20[genbank_20GCA_5F000333855.2_202016-09- 30] 1,959 sequences; 32,520,418 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq15 91.5 3e-13 seq20 86.0 1e-11 >seq15 Length=659801 Score = 91.5 bits (100), Expect = 3e-13 Identities = 154/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 243532 GAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGA 243591 || || || |||||||| ||||| | || |||||||||||| | || || |||| | Sbjct 501807 GAGTTTATCTGCGACGCGCTTCCAGTAAGACTCATTGGCATGAACGCGGAGCTGATGGCA 501748 Query 243592 CAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTAC 243651 | |||||||| || || || ||||| | | | | ||||| | ||||| ||| Sbjct 501747 CGTTACATCGAGTTTGTTGCGGACCGACTGCTTGTGTCACTTGGCGAGGAGAAGCACTAC 501688 Query 243652 AACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTC 243711 ||| | | ||||||| ||| |||||| | || |||||||| || || || || ||| Sbjct 501687 AACGTGTCGCAGCCCTTTGACTTCATGGAGATGATCTCGCTTCAGGGCAAGACGAATTTC 501628 Query 243712 TTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGTGTGATGA 243754 || || ||| || || || || ||| ||||||| |||| Sbjct 501627 TTTGAGAAGAAGGTGAGCGAGTACCAAAAGGCTGGTGTCATGA 501585 >seq20 Length=978369 Score = 86.0 bits (94), Expect = 1e-11 Identities = 158/232 (68%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 243532 GAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGA 243591 || || || ||| |||| ||||| | || |||||||||||| | | | ||| | Sbjct 867233 GAGTTTATCTGCCACGCGCTTCCAGTAAGACTCATTGGCATGAACGCGAAGTTGATGACA 867174 Query 243592 CAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTAC 243651 |||||||||| ||||| || ||||| | | | | ||||| | |||| ||| Sbjct 867173 GAGTACATCGAGTTCGTTGCGGACCGACTGCTTGTGTCACTTGGCGAGAAGAAGCACTAC 867114 Query 243652 AACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTC 243711 ||| | | ||||||| ||| |||||| | || |||||||| || || | |||||| Sbjct 867113 AACGTGTCGCAGCCCTTTGACTTCATGGAGATGATCTCGCTTCAGGGCAAGGCCAACTTC 867054 Query 243712 TTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGTGTGATGAAACCAGAGG 243763 || || | | | ||| |||| || ||| ||||||| ||||| | |||| Sbjct 867053 TTTGAGAGGAGGGTCGGTGAGTACCAAAAGGCTGGTGTCATGAACACTGAGG 867002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102852318056650