Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endotrypanum_20monterogeii_20[genbank_20GCA_5F000333855.2_202016-09- 30] 1,959 sequences; 32,520,418 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq21 152 5e-32 >seq21 Length=1031504 Score = 152 bits (168), Expect = 5e-32 Identities = 291/426 (68%), Gaps = 2/426 (0%) Strand=Plus/Plus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 || || ||||| || ||||| || || || || ||| || ||| || || || ||| Sbjct 213029 GCGACTCCGACTCTCTTCAATGCCGGTACGCCAAAGCCGCAAATGAGCTCATGCTTTCTG 213088 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 | | ||| | ||| |||| || |||| ||||| |||||||| ||||| Sbjct 213089 GTTGCATCCAAAGATGACAGCATCGAGGGTATTTACGACACGCTCAAGGAGTGTGCCCTG 213148 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 ||| ||| || || || || || | ||| ||| || | || || ||| | Sbjct 213149 ATCAGCAAAGCAGCCGGTGGCATTGGCCTGCATGTGCACAACATCCGCGCGGAGGGCAGC 213208 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 ||||| ||| || || || || || ||||| ||||| || ||| | |||||||||||| Sbjct 213209 TACATTGCCGGCACGAACGGTACGTCGAACGGGCTCGTGCCGATGTTGCGGGTCTTCAAC 213268 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| | ||||||||||||||||||||||| || | | | ||||| | ||||| |||| Sbjct 213269 AACACCGCGCGCTACGTGGACCAGGGTGGCGGTAAGCGCAAGGGCGCCTTCGCCATCTAC 213328 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCAC-GGCAA 94250 || ||||| |||||||| ||| | | ||| | ||| | | | ||| ||||| Sbjct 213329 CTTGAGCCGTGGCACGCCGACATTTTTGGCTTCCTGTTGCTG-AAGCGCAACACGGGCAA 213387 Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 ||| || | ||| | ||||||||||||| || ||||| ||||| || || |||| Sbjct 213388 GGATGATCAGCGTGCCCGCGACCTCTTCTACGGGCTTTGGGTCCCAGATCTGTTCATGAC 213447 Query 94311 ACGCGT 94316 ||| || Sbjct 213448 ACGGGT 213453 Score = 95.1 bits (104), Expect = 1e-14 Identities = 109/144 (76%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 94486 GAGACGGGTACGCCCTACATCTTGTTCAAGGACTC-TGTCAACGCCAAGTCCAACCAGCA 94544 |||||||| || ||||| | ||||||||| ||| |||| || || |||||| Sbjct 213623 GAGACGGGCGGCCCTTACATTCTCTTCAAGGACCAATGT-AACGAGAAATCTAACCAGAG 213681 Query 94545 GCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCC 94604 | |||| ||| |||||| ||||||| ||||||||||||||||||||||| ||| || Sbjct 213682 GAACCTTGGGACCATCAAGTGCTCGAACCTGTGCACCGAGATTGTCGAGTACACTAGCCC 213741 Query 94605 GGACGAGATTGCTGTGTGTAACCT 94628 || |||| || ||||| ||||| Sbjct 213742 GGGGGAGACAGCGGTGTGCAACCT 213765 Score = 86.0 bits (94), Expect = 6e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 95089 AACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAAC 95148 ||| | || || || |||||||||||||| || ||||| ||||||| || ||||||||| Sbjct 214220 AACTCCCTCCTAGTCGCCCCCATGCCCACCGCATCCACCTCGCAGATTCTCGGCAACAAC 214279 Query 95149 GAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTC 95208 |||| || || ||||| ||||| || | || | || ||||| |||||| || Sbjct 214280 GAGTGCTTTGAGCCCTTTACCTCGAATATTTATGTTCGTCGTGTGCTGAGCGGGGAGTTT 214339 Query 95209 CCCGTCATCAACAAGCACCT 95228 || || | |||||| |||| Sbjct 214340 CCTGTGGTGAACAAGTACCT 214359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494711085465640