Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endotrypanum_20monterogeii_20[genbank_20GCA_5F000333855.2_202016-09- 30] 1,959 sequences; 32,520,418 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq15 235 5e-57 seq20 172 5e-38 seq30 123 2e-23 seq36 107 2e-18 seq25 107 2e-18 >seq15 Length=659801 Score = 235 bits (260), Expect = 5e-57 Identities = 560/831 (67%), Gaps = 18/831 (2%) Strand=Plus/Plus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||| || ||| ||||| || |||| |||||| |||||||| ||||| || || |||| Sbjct 501586 CATGACACCAGCCTTTTGGTACTCGCTCACCTTCTTCTCAAAGAAATTCGTCTTGCCCTG 501645 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGAT 132710 | || || | | ||| || || ||||| | | |||||||||||| || Sbjct 501646 AAGCGAGATCATCTCCATGAAGTCAAAGGGCTGCGACACGTTGTAGTGCTTCTCCTCGCC 501705 Query 132711 CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACAT-GGTTTCGCAAT 132769 || || ||||| | ||| || || ||||||||||| | | ||| | | ||| | Sbjct 501706 AAGTGACACAAGCAGTCGGTCCGCAACAAACTCGATGTAACGTGCCATCAGCTCCGC-GT 501764 Query 132770 TAAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCG 132829 | | || | || | || || ||||| ||| || ||| |||||||| | |||| Sbjct 501765 TCATGCCAATGAGTCTTACTGGAAGCGCGTCGCAGATAAACTCGCGCTCGATGTCCACCG 501824 Query 132830 CGTCGGTGACGATTTCCCTAACGCGCGC-CGCGCTCGGCCGTTGCACCAAATGC---TTG 132885 |||| || ||| ||| |||||| | |||| | || | | | ||| ||| Sbjct 501825 CGTCCACGATGATCTCCAGTACGCGCTCGCGCG-ACAGCTTGTTCTTGATGTGCGAGTTG 501883 Query 132886 AACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTG 132945 ||| || || ||||| ||| |||| ||||||||| | || ||||| || |||||| Sbjct 501884 TACAGCAGACAGGCAAAATCGGTGTGCAGGCCCTCGTCGCGCGAGATGAGCTCATTGCTG 501943 Query 132946 AAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCC 133005 || |||| || ||||| |||||||| || || | ||| || | || ||| || Sbjct 501944 AACGTCAGCCCCGGCATCAGGCCGCGCTTCTTCATCCAGAACAGCGCACAGAAGGACCCG 502003 Query 133006 GAAAAGAAGACGCCCTCGACGGCCGCGAAAGCC-ACCAGGCGCTCGCCGAACGTGGCTTC 133064 || ||||| | |||||| || || || |||||| | ||| ||||| ||| |||| Sbjct 502004 GAGAAGAATATGCCCTCCACCGCGGC-AAAGCCGATCAGTCGCTCCTGGAA----GCTTG 502058 Query 133065 T-TTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTT 133123 | ||| | ||||| |||| |||||| || ||||| | | || ||| || | || | Sbjct 502059 TACCGCTCCCAATCCACCGCATCGCCCAGTCTGCCTTCTTCTGGATGCATGGGACGGTCT 502118 Query 133124 CGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACG-CACGTAGGTGTCGATGAGG 133182 ||| |||| || || || || ||||| | || | || | || ||||| | || Sbjct 502119 GGATCGCGTGCAGCAGTCGCAGCTTCTCCT-CGCTGTCCGTGATATACGTGTCCAGCAGC 502177 Query 133183 GTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGC 133242 |||||| | |||||||| | ||||||||| | || || ||||| ||| |||| Sbjct 502178 ACAGAATACGTCTCCGAGTGGATGTTCTCCATCATCAGCTGGAACCCGTAGAAGGCCCGC 502237 Query 133243 GCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCG 133302 ||||| |||| ||| || | ||| |||| ||||||| || |||||||||| Sbjct 502238 GCCTCCGGTACCTTCACATCGTTCATGAACCGCTGCGCCAGATTCTCCATGACGATGCCA 502297 Query 133303 TCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAG 133362 |||||| ||||||| || || |||||||| |||||||| || |||| | || | || Sbjct 502298 TCGCTGCCGGCGAAGAATGCAAGCACGTGTTTGATGAAGTGCTGCTCATCCGCGCT-GAG 502356 Query 133363 CG-CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCA 133412 || | ||||||| | |||| ||| || ||| | |||||| || ||||| Sbjct 502357 CGTCACCCAGTCCTTCATGTCGTTGCCCAAGTCGATCTCCTCCACCGTCCA 502407 >seq20 Length=978369 Score = 172 bits (190), Expect = 5e-38 Identities = 541/830 (65%), Gaps = 16/830 (2%) Strand=Plus/Plus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||| || ||| ||||| || || || ||| | ||||||| || || | || |||| Sbjct 867012 CATGACACCAGCCTTTTGGTACTCACCGACCCTCCTCTCAAAGAAGTTGGCCTTGCCCTG 867071 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGAT 132710 | || || | | ||| || || ||||| | | |||||||||||| | || Sbjct 867072 AAGCGAGATCATCTCCATGAAGTCAAAGGGCTGCGACACGTTGTAGTGCTTCTTCTCGCC 867131 Query 132711 CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGT-TTCGCAAT 132769 || || ||||| | ||| || |||||||||||||| | | ||| ||||| | Sbjct 867132 AAGTGACACAAGCAGTCGGTCCGCAACGAACTCGATGTACTCTGTCATCAACTTCGCGTT 867191 Query 132770 TAAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCG 132829 | | || | || | || || ||||| | | || ||| |||||||| | |||| Sbjct 867192 CATG-CCAATGAGTCTTACTGGAAGCGCGTGGCAGATAAACTCGCGCTCGATGTCCACCG 867250 Query 132830 CGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCG-TTGCACCAAATGC-----T 132883 || || ||| ||| |||||| | || || | | ||| | ||| | Sbjct 867251 CGCTCACGATGATCTCCAGCACGCGCTC---GCGCGACAGCTTGTTCTTGATGTACGAGT 867307 Query 132884 TGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGC 132943 || ||| || || || || ||| |||| ||||||||| | || ||||| || |||| Sbjct 867308 TGTACAGCAGACAGGCGAAATCGGTGTGCAGGCCCTCGTCGCGCGAGATGAGCTCATTGC 867367 Query 132944 TGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGC 133003 |||| |||| || ||||| ||||| || || | ||||| |||| || ||| | Sbjct 867368 TGAACGTCAGCCCCGGCATCAGGCCACGCTTCCTCAGCCAGAATAGCGCACAGAAGGACC 867427 Query 133004 CCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCC-ACCAGGCGCTCGCCGAACGTGGCT 133062 | || ||||| | |||||| || || || |||||| | ||| ||||| ||| | || Sbjct 867428 CGGAGAAGAATATGCCCTCCACCGCGGC-AAAGCCGATCAGTCGCTCCTGGAAGCTTGCA 867486 Query 133063 TCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTT 133122 | ||| | | ||| |||| |||||| || ||||| | | || ||| || | || Sbjct 867487 CC---GCTCCCAACCCACCGCATCGCCCAGTCTGCCTTCTTCTGGATGCATGGAACGGTC 867543 Query 133123 TCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGG 133182 | ||| |||| || || || | ||||| | | | || ||||| | || Sbjct 867544 TGGATCGCGTGCAGCAGTCGCACCTTCTCCGCGCTGTCTGTGATATACGTGTCCAGCAGC 867603 Query 133183 GTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGC 133242 ||||||||||| ||||| | ||||||||| | || | ||||| || | ||| Sbjct 867604 AGAGAATACATTTCTGAGTGGATGTTCTCCATCATCAGCTGCAGCCCGTAGAAAAATCGC 867663 Query 133243 GCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCG 133302 ||||| |||| ||| || | ||| |||| ||| ||| || |||||||||| Sbjct 867664 GCCTCCGGTACCTTCACATCGTTTATGAACCGCTGCGCCAAATTCTCCATGACGATGCCA 867723 Query 133303 TCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAG 133362 |||||| |||| || || || ||||||||||| ||||| || |||| | || | | Sbjct 867724 TCGCTGCCGGCAAAGAATGCAAGCACGTGCTTAATGAAGTGCTGCTCATCCGCGCTGAGC 867783 Query 133363 CGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCA 133412 | ||||||| | | |||| ||| || ||| ||||| || || ||||| Sbjct 867784 TTCGCCCAGTCTCTCATGTCGTTGCCCAAGTCAACCTCATCCACCGTCCA 867833 >seq30 Length=3727717 Score = 123 bits (136), Expect = 2e-23 Identities = 169/231 (73%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| || ||||| || || | |||| || ||| | | | Sbjct 1375630 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCGCTCGAGGTGGAGTCGAGC 1375571 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-ACC 38361 |||| | | |||| | || | || |||| ||||| ||||| || ||||||| ||| Sbjct 1375570 GACACGATCGAGAACG-TCAAGGCGAAGATCCAGGACAAGGAGGGCAT-CCCGCCGGACC 1375513 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | || ||||| ||||||| || | ||||| || ||||||| Sbjct 1375512 AGCAGCGCCTGATCTTTGCCGGCAAGCAGCTGGCGGAGGGCCGCACGCTGGCGGACTACA 1375453 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 ||||||| ||||| | |||||||| ||||||||||| || | ||||||| Sbjct 1375452 ACATCCAGAAGGAGTCCACGCTGCACCTGGTGCTGCGTCTGCGCGGCGGCC 1375402 Score = 116 bits (128), Expect = 4e-21 Identities = 167/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| || ||||| || || | |||| || ||| | | | Sbjct 1379066 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCGCTCGAGGTGGAGTCGAGC 1379007 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-ACC 38361 |||| | | |||| | || | || |||| ||||| ||||| || ||||||| ||| Sbjct 1379006 GACACGATCGAGAACG-TCAAGGCGAAGATCCAGGACAAGGAGGGCAT-CCCGCCGGACC 1378949 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | || ||||| |||||||| || | ||||| || ||||||| Sbjct 1378948 AGCAGCGCCTGATCTTTGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTGGCGGACTACA 1378889 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||| ||||| | |||||||| |||||||||| || | || ||| Sbjct 1378888 ACATCCAGAAGGAGTCCACGCTGCACCTGGTGCTGCGCCTGCGCGGTGGC 1378839 Score = 116 bits (128), Expect = 4e-21 Identities = 167/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| || ||||| || || | |||| || ||| | | | Sbjct 1379294 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCGCTCGAGGTGGAGTCGAGC 1379235 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-ACC 38361 |||| | | |||| | || | || |||| ||||| ||||| || ||||||| ||| Sbjct 1379234 GACACGATCGAGAACG-TCAAGGCGAAGATCCAGGACAAGGAGGGCAT-CCCGCCGGACC 1379177 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | || ||||| |||||||| || | ||||| || ||||||| Sbjct 1379176 AGCAGCGCCTGATCTTTGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTGGCGGACTACA 1379117 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||| ||||| | |||||||| |||||||||| || | || ||| Sbjct 1379116 ACATCCAGAAGGAGTCCACGCTGCACCTGGTGCTGCGCCTGCGCGGTGGC 1379067 Score = 116 bits (128), Expect = 4e-21 Identities = 167/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| || ||||| || || | |||| || ||| | | | Sbjct 1380614 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCGCTCGAGGTGGAGTCGAGC 1380555 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-ACC 38361 |||| | | |||| | || | || |||| ||||| ||||| || ||||||| ||| Sbjct 1380554 GACACGATCGAGAACG-TCAAGGCGAAGATCCAGGACAAGGAGGGCAT-CCCGCCGGACC 1380497 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | || ||||| |||||||| || | ||||| || ||||||| Sbjct 1380496 AGCAGCGCCTGATCTTTGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTGGCGGACTACA 1380437 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||| ||||| | |||||||| |||||||||| || | || ||| Sbjct 1380436 ACATCCAGAAGGAGTCCACGCTGCACCTGGTGCTGCGCCTGCGCGGTGGC 1380387 >seq36 Length=555156 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| || || | |||| || ||| | | | Sbjct 340789 ATGCAGATCTTTGTGAAGACTCTGACCGGCAAGACGATTGCGCTCGAGGTTGAGTCGAGC 340730 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | || | || |||| ||||| ||||| || ||| | ||||| Sbjct 340729 GATACGATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 340670 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| |||||||| || | ||||| ||| ||||||||| Sbjct 340669 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 340610 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 || || ||||| | |||||||| |||||||||| || | || |||| Sbjct 340609 ATTCAGAAGGAGTCCACGCTGCACCTGGTGCTGCGCCTGCGCGGTGGCC 340561 >seq25 Length=1382006 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || ||||| || ||||| || || | |||| |||||| | | | Sbjct 844249 ATGCAGATCTTTGTGAAGACGCTGACCGGCAAGACGATTGCGCTCGAAGTCGAGTCGAGC 844190 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | || | || || | ||||| ||||| || ||| | ||||| Sbjct 844189 GATACGATCGAGAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 844130 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| |||||||| || | ||||| || ||||||||| Sbjct 844129 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGTCGCACGCTGGCGGACTACAAC 844070 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 ||||| ||||| | ||| |||| |||||||||| || | || |||| Sbjct 844069 ATCCAGAAGGAGTCCACGTTGCACCTGGTGCTGCGCCTGCGCGGTGGCC 844021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500160552018560