Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endotrypanum_20monterogeii_20[genbank_20GCA_5F000333855.2_202016-09- 30] 1,959 sequences; 32,520,418 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq21 187 3e-42 seq17 86.0 7e-12 seq28 84.2 3e-11 >seq21 Length=1031504 Score = 187 bits (206), Expect = 3e-42 Identities = 840/1319 (64%), Gaps = 33/1319 (3%) Strand=Plus/Minus Query 109769 AGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAG 109828 |||| || || ||||| |||||||| || || || | ||||| || ||||||||||| | Sbjct 214295 AGGGCTCAAAGCACTCGTTGTTGCCGAGAATCTGCGAGGTGGATGCGGTGGGCATGGGGG 214236 Query 109829 CCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACC---CGCTCACGCATTGCGTCCC 109885 | | || || ||| || | || |||| |||| | || | |||| ||| Sbjct 214235 CGACTAGGAGGGAGTTGCGCATGCCG---GTCTGTACCACCCTCTGTTTGAGTGCGGCCC 214179 Query 109886 AATCATAACGACCACTAAATTTAGTCTCACCATC--CCACATATCTGGTTGAAGTACACC 109943 | || | |||||||| | | ||| || |||||| || || || | | Sbjct 214178 AGTCCCATCGACCACTG--TGCGGCCTCGGGTTCTTCCACATGTCAAACTGCAGCGTAGC 214121 Query 109944 CTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGA 110003 |||| || ||||| || | ||||| ||||||| |||||| || |||| ||| Sbjct 214120 TGCAGCGGCCGGAGACCCTTCAAAACTGTCGTACGGCCCCTCCTCCGTTGCCAGCTCCAT 214061 Query 110004 TGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGA 110063 || ||||| | || || |||| |||||| || || | || |||| | || | Sbjct 214060 CGACGCCTCCACAGCGGCGAAGTACAAAGTCTCGAAGATCTCCGCGTTCAGCTGCCGCGC 214001 Query 110064 CTCTTCACAGTCGAAGGGAAGACCACAA-AGAATAAACACATCCGCTAGACCCTGAACAC 110122 | | || | |||||| || || || ||||| || |||||||| || || |||| Sbjct 214000 CCCCTCCGACATGAAGGGCAG-CCGCATGAGAATGAAGGTGTCCGCTAGGCCTTGCACAC 213942 Query 110123 CGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGT 110182 | | | |||||||| ||||||| ||| || || ||||| ||||||||| ||| Sbjct 213941 CAATGGCGATGGGGCGGTGCTTCAGGTTGCTCAAGCGCGCCGTTTCCACGGGGTAATAGT 213882 Query 110183 TGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGT 110242 ||||||| || || ||||| | || || | ||| | | | || || || | Sbjct 213881 TGCGGTCAATCACGCGATTTAAGTTGCGTGTGA---TCTGCCTCAC--CACGGTGTACAT 213827 Query 110243 C-----GTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGCAATAGACGC 110297 | || || |||| | |||| | ||| | || | ||||| ||||| Sbjct 213826 CAGTTGGTGATTGAACTCGCGCTTCTCAACGTCGACGAAGCGCGGCAAAGCAACCGACGC 213767 Query 110298 AAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTT 110357 || |||||||| | ||||| | | ||||| || | ||| || || |||| ||| Sbjct 213766 GAGGTTGCACACCGCTGTCTCCCCCGGGCTAGTGTACTCGACAATCTCGGTGCACAGGTT 213707 Query 110358 GGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATA 110417 || | ||| ||| || | |||| |||| || ||||| ||| ||| ||||| | Sbjct 213706 CGAGCACTTGATGGTCCCAAGGTTCCTCTGGTTAGATTTCTCGTTACATTGGTCCTTGAA 213647 Query 110418 GAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGC 110477 ||| ||||| ||| || || || | | |||| || ||||| ||| | ||| Sbjct 213646 GAGAATGTAAGGGCCGCCCGTCTCGATTAGCGACTCCAGTATGGCAAACCACAAATCCTG 213587 Query 110478 GGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAA 110537 ||||| | ||| ||| | |||| || |||||||| | ||| | || | ||| Sbjct 213586 CGCGGGTATAGTCCTCTTACCACGACCCTCGGCCTCGTACCTCTGGTAAAGCTCATTAAA 213527 Query 110538 TTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCA-AT 110596 | || ||||| ||| |||||| |||| ||| | ||| | ||| || Sbjct 213526 TGCCGCGCCGTAGCAATCGCTGAGACCCGGGCAGTTGTGGGGGTCCATGAGCGTCCACAT 213467 Query 110597 TTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGT 110656 || | ||| ||| || | | ||||||||| || || | ||| | | | |||| |||| Sbjct 213466 CCCCTCGCTCTTCACCCGTGT-CATGAACAGATCTGGGACCCAAAGCCCGTAGAAGAGGT 213408 Query 110657 CACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATAT 110716 | ||| ||| || || | || |||| | ||| || ||| | | || | Sbjct 213407 CGCGGGCACGCTGATCATCCTTGCCCGTGTTGCGCTTCAGCAACAGGAAGCCAAAAATGT 213348 Query 110717 CCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG---ACGACCCGCCTGGT 110773 | | |||||| || || || |||| |||| || ||||| || || || |||||| Sbjct 213347 CGGCGTGCCACGGCTCAAGGTAGATGGCGAAGGCGCCCTTGCGCTTACCGCCACCCTGGT 213288 Query 110774 TAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGAC 110833 || ||||| || ||| |||||||||| | ||| || | | || | || || Sbjct 213287 CCACGTAGCGCGCGGTGTTGTTGAAGACCCGCAACATCGGCACGAGCCCGTTCGACGTAC 213228 Query 110834 CATTTGTACCCCTAATT---CTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAA 110890 | || || || ||| ||| || || || |||| ||| | ||||| |||| Sbjct 213227 CGTTCGTGCCGGCAATGTAGCTGCCCTCC---GCGCGGATGTTGTGCACATGCAGGCCAA 213171 Query 110891 TACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAA 110950 | ||||| || || || || | |||||||| |||| || | |||||||| || | Sbjct 213170 TGCCACCGGCTGCTTTGCTGATCAGGGCACACTCCTTGAGCGTGTCGTAAATACCCTCGA 213111 Query 110951 TCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCG 111010 | || | ||| |||| |||||||| || ||| || || ||||| || | Sbjct 213110 TGCTGTCATCTTTGGATGCAACCAGAAAGCATGAGCTCATTTGCGGCTTTGGCGTACCGG 213051 Query 111011 CATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGTTGTATGTG 111069 |||||||||| || || ||||| ||| |||| | ||||| |||||| |||||||||| Sbjct 213050 CATTGAAGAGAGTCGGAGTCGCGTGAGTGAAGAATCCTTGTGACATCAAGTTGTATGTG 212992 >seq17 Length=713351 Score = 86.0 bits (94), Expect = 7e-12 Identities = 73/88 (83%), Gaps = 4/88 (5%) Strand=Plus/Minus Query 136705 GCACCGT---TCTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACG 136761 ||||||| ||| |||||||||| ||||||||||||| || |||| |||||||||| Sbjct 494294 GCACCGTAGCTCTCATAGCTCAGTCGGTTAGAGCGTGGGTCTAATAAGCCCAAGGTCACA 494235 Query 136762 GGTTCGAGCCCCGTTGGGAACAGCTTTT 136789 ||||||| ||| ||||||| || ||||| Sbjct 494234 GGTTCGACCCCTGTTGGGAGCA-CTTTT 494208 Score = 84.2 bits (92), Expect = 3e-11 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 136712 TCTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCC 136771 ||| |||||||||| ||||||||||||| || |||| |||||||||| ||||||| || Sbjct 492872 TCTCATAGCTCAGTCGGTTAGAGCGTGGGTCTAATAAGCCCAAGGTCACAGGTTCGACCC 492931 Query 136772 CCGTTGGGAACAGCTTTT 136789 | ||||||| || ||||| Sbjct 492932 CTGTTGGGAGCA-CTTTT 492948 Score = 84.2 bits (92), Expect = 3e-11 Identities = 68/81 (84%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 136709 CGTTCTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGA 136768 || ||| |||||||||| ||||||||||||| || |||| |||||||||| ||||||| Sbjct 493977 CGCTCTCATAGCTCAGTCGGTTAGAGCGTGGGTCTAATAAGCCCAAGGTCACAGGTTCGA 493918 Query 136769 GCCCCGTTGGGAACAGCTTTT 136789 ||| ||||||| || ||||| Sbjct 493917 CCCCTGTTGGGAGCA-CTTTT 493898 Score = 84.2 bits (92), Expect = 3e-11 Identities = 68/81 (84%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 136709 CGTTCTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGA 136768 || ||| |||||||||| ||||||||||||| || |||| |||||||||| ||||||| Sbjct 494420 CGCTCTCATAGCTCAGTCGGTTAGAGCGTGGGTCTAATAAGCCCAAGGTCACAGGTTCGA 494479 Query 136769 GCCCCGTTGGGAACAGCTTTT 136789 ||| ||||||| || ||||| Sbjct 494480 CCCCTGTTGGGAGCA-CTTTT 494499 >seq28 Length=1567521 Score = 84.2 bits (92), Expect = 3e-11 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 136712 TCTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCC 136771 ||| |||||||||| ||||||||||||| || |||| |||||||||| ||||||| || Sbjct 422648 TCTCATAGCTCAGTCGGTTAGAGCGTGGGTCTAATAAGCCCAAGGTCACAGGTTCGACCC 422707 Query 136772 CCGTTGGGAACAGCTTTT 136789 | ||||||| || ||||| Sbjct 422708 CTGTTGGGAGCA-CTTTT 422724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588961577450200