Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endotrypanum_20monterogeii_20[genbank_20GCA_5F000333855.2_202016-09- 30] 1,959 sequences; 32,520,418 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq33 149 5e-31 >seq33 Length=510537 Score = 149 bits (164), Expect = 5e-31 Identities = 375/563 (67%), Gaps = 18/563 (3%) Strand=Plus/Minus Query 29824 TAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGA 29883 || ||||||||||| || |||||||| || | ||| || ||| |||||| || | | Sbjct 366712 TACACGTGAGCGTCACCGAGGGTGTGCACGAGCTCGCCGGGTCGTAGCCCTGTCGCCTTC 366653 Query 29884 GCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATG 29943 || || | | ||||| ||||| ||| ||||||||||||||| || ||||| |||||| Sbjct 366652 GCAATAAGGATGGTGAGCAGAGAATAGGAGGCGATGTTAAAGGGAACGCCGAGACCCATG 366593 Query 29944 TCCCCCGACCTCTGGTAGAGCTGACACGAGAGCT-CTCCGTC-----GCTCACGTAAAAC 29997 || | ||| | ||||| | | || || |||| || |||| | ||||||| ||| Sbjct 366592 TCACACGAACGTTGGTACATCATGCAGGACAGCTCCTTCGTCTCCGTGTTCACGTAGAAC 366533 Query 29998 TGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCG 30057 ||| | ||||||||| || || ||||| | ||| | | ||||||||||| Sbjct 366532 TGAGCGAGCAAGTGGCACGGCGGGAGCGCCATCTTGGGCAACGCGCTTGGGTTCCAGGCA 366473 Query 30058 CACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGC 30117 | || || || | || | ||||| ||| ||| | || || || | | | Sbjct 366472 GTGAAGAGGAGACGGCGATCGTTCGGGTTTTTCTTGAGGGTCTCGACAATGTACTTGATC 366413 Query 30118 TGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGC 30177 |||||||| || || ||||| ||| | || ||||||| || |||||||| Sbjct 366412 TGATCCACGCCTTCGCCATCGTAGTTTGCATCAAACCCCCTGTACTCCGCCCCGAAATGA 366353 Query 30178 CTCCACTGGAACCCGTACACCGGTCCCAGGTC----TCCCTCTTCCCTGTGCTCGAAGCC 30233 | ||||||||| ||||| || ||||| || || || | ||| |||| || || Sbjct 366352 CGCCACTGGAAGCCGTATACTGGTCCGAGATCCATTTCTTTATTCTCTGT----GAGACC 366297 Query 30234 CCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGA 30293 | |||| | || || | || ||||| ||||||| || | | |||| || | Sbjct 366296 ACGACTGTCGAGGAACTCGCGCGAGCCGTTACCGTCCCAAATATGGATATCCTTGTCCGC 366237 Query 30294 GA-GCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC-CACGACGGCC 30351 || | ||| | | || ||| || | || ||||| ||||| ||||| ||| || | Sbjct 366236 GAGGATCTGCGCA-TTCGTGTTGCCGCGGAGAAACCAGAGCAGTTCCTCACAC-ACACCG 366179 Query 30352 TTCCAAAAGACCCTCTTGGTCGT 30374 ||||||||| | ||||||||| Sbjct 366178 CGCCAAAAGACACGCTTGGTCGT 366156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408607844127107